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Updated: Jul 18, 2026

Strand-Specific Analysis of Proteins at Replicating DNA Strands by Enrichment and Sequencing of Protein-Associated Nascent DNA Method
Published on: May 2, 2025
Mapping yeast origins of replication via single-stranded DNA detection
Wenyi Feng1, M K Raghuraman, Bonita J Brewer
1Department of Genome Sciences, Box 357730, University of Washington, Seattle, WA 98195, USA.
Researchers developed a new method to map DNA replication origins in yeast. This technique successfully identified known and novel origins, proving effective in both Saccharomyces cerevisiae and Schizosaccharomyces pombe.
Area of Science:
- Molecular Biology
- Genetics
- Cell Biology
Background:
- Saccharomyces cerevisiae studies provide a model for eukaryotic DNA replication.
- Accurate DNA replication ensures genetic stability.
- Previous genomic-scale origin mapping in S. cerevisiae used microarray techniques.
Purpose of the Study:
- To introduce a novel method for mapping DNA replication origins.
- To assess the efficacy of this new technique in identifying known and novel origins.
- To demonstrate the applicability of the method in other eukaryotic organisms.
Main Methods:
- Development of a new origin mapping technique based on single-stranded DNA detection in yeast.
- Application of the method to Saccharomyces cerevisiae.
- Application of the method to Schizosaccharomyces pombe.
Main Results:
- The single-stranded DNA detection method identified the majority of previously known replication origins.
- The technique successfully identified novel replication origins.
- The method proved effective for origin mapping in Schizosaccharomyces pombe.
Conclusions:
- The single-stranded DNA detection method is a valuable tool for eukaryotic DNA replication origin mapping.
- This technique offers a complementary approach to existing methods.
- The method's utility extends to diverse eukaryotic systems, including Schizosaccharomyces pombe.
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Published on: September 11, 2022
06:40G2-seq: A High Throughput Sequencing-based Technique for Identifying Late Replicating Regions of the Genome
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