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Updated: Jul 17, 2026

Conjugative Mating Assays for Sequence-specific Analysis of Transfer Proteins Involved in Bacterial Conjugation
Published on: January 4, 2017
Detection of conjugation related type four secretion machinery in Aeromonas culicicola
Ashraf Yusuf Rangrez1, Kannayakanahalli Maheshwarappa Dayananda, Santosh Atanur
1Molecular Biology Unit, National Centre for Cell Science, Pune University Campus, Pune, Maharashtra, India.
Background:
Aeromonas sp. can now be considered relatively common enteropathogens due to the increase of diseases in humans. Aeromonas culicicola is a gram negative rod-shaped bacterium isolated for the first time from the mosquito mid-gut, but subsequently detected in other insects and waters also. Our previous study discovered that A. culicicola harbors three plasmids, which we designated as pAc3249A, pAc3249B and pAc3249C. We investigated and report here the existence and genetic organization of a Conjugal Type IV Secretion System (TFSS) in pAc3249A.
Methodology/Principle Finding:
The complete operon is 11,061 bp in length and has G+C content of 47.20% code for 12 ORFs. The gene order and orientation were similar to those found in other bacteria with some differences. We have designated this system as AcTra for Aeromonas culicicola transfer system. BLAST results of ORFs and phylogenetic analysis showed significant similarity towards the respective proteins of the IncI2 plasmid R721 of E. coli. Other bioinformatics studies have been performed to predict conserved motifs/domains, signal peptides, transmembrane helices, etc. of the ORFs.
Conclusions/Significance:
BLAST results of ORFs and phylogenetic analysis showed significant similarity towards the respective proteins of the IncI2 plasmid R721 of E. coli.
Insights
Aeromonas culicicola harbors a novel Conjugal Type IV Secretion System (TFSS) on its pAc3249A plasmid. This AcTra system shares significant genetic similarity with the IncI2 plasmid R721 in E. coli.
Area of Science:
- Microbiology
- Genetics
- Bacterial Pathogenesis
Background:
- Aeromonas sp. are increasingly recognized as common enteropathogens.
- Aeromonas culicicola, a gram-negative bacterium, is found in various environments.
- A. culicicola possesses three plasmids: pAc3249A, pAc3249B, and pAc3249C.
Purpose of the Study:
- To investigate the existence and genetic organization of a Conjugal Type IV Secretion System (TFSS) within the pAc3249A plasmid of A. culicicola.
Main Methods:
- Bioinformatic analysis, including BLAST searches and phylogenetic analysis.
- Identification and characterization of open reading frames (ORFs) within the identified operon.
- Prediction of conserved motifs, signal peptides, and transmembrane helices for the ORFs.
Main Results:
- A complete operon of 11,061 bp, designated AcTra, was identified on pAc3249A, encoding 12 ORFs.
- The AcTra system exhibits significant genetic and protein similarity to the IncI2 plasmid R721 found in E. coli.
- Bioinformatic analyses provided insights into the functional domains and structural features of the AcTra system components.
Conclusions:
- The pAc3249A plasmid of A. culicicola harbors a functional Conjugal Type IV Secretion System (TFSS).
- The AcTra system represents a novel TFSS with strong homology to known systems in other bacteria, suggesting conserved mechanisms of conjugation.
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