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Updated: Jul 17, 2026

Workflow Based on the Combination of Isotopic Tracer Experiments to Investigate Microbial Metabolism of Multiple Nutrient Sources
Published on: January 22, 2018
[Metabolic integration of organisms within symbiotic systems]
Abstract:
Adaptation of organisms to coexisence in symbiotic systems is usually related to significant metabolic changes resulting in the integration of the biochemical pathways of the partners. In the symbioses between plants and nitrogen-fixing organisms, between heterotrophic and autotrophic organisms, as well as between animals and microorganisms providing the consumption of plant biomass, the systems of C- and N-metabolism, controlling the utilization of various sources of nitrogen (N2, organic and inorganic compounds, metabolic waste of the host) and carbon (CO2, plant polymers), of the partners are tightly integrated. Bilateral biochemical links between partners are typical to mutualistic symbioses (wherein biotrophic nutrition predominates, in some cases including necrotrophy of secondary origin). In antagonistic symbioses, unilateral links predominate, though active assimilation of the pathogen's secondary metabolites by the host is also possible. In most mutualistic symbioses, integrated metabolic ties have derived from trophic chains in biocenoses (syntrophic consortia, "predator-prey" systems), but not from the systems where the pathogens consume host metabolites. At the same time, molecular analysis of symbiotic interactions has shown that symbioses considerably differ from biocenoses, where the cycling of nutrients and energy implies no functional integration of the partner's genes.
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