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ABC Transporters: Exporter01:31

ABC Transporters: Exporter

ATP-binding cassette or ABC transporter is the largest superfamily of integral membrane proteins. The transporters have transmembrane-binding domains (TMDs) and nucleotide-binding domains (NBDs). The TMDs are specific to their substrates, whereas the NBDs are similar to engines that complete ATP hydrolysis to complete the substrate transport. They can be full transporters consisting of two TMDs and NBDs, half transporters with one TMD and NBD, while some encoded with a single TMD or NBD are...
ABC Transporters: Importer01:27

ABC Transporters: Importer

ATP-binding cassette or ABC transporters are a class of ATP-driven pumps that hydrolyze ATP to move solutes across the membrane. They can be grouped into importers and exporters. While exporters are present in all domains of life, importers exist only in bacteria and some plants.
In bacteria, based on the number of transmembrane helices and the chemical nature of their substrates, the ABC importers can be divided into three types:
The Significance of Membrane Transport01:44

The Significance of Membrane Transport

The transport of solutes across the cell membrane is essential for metabolic processes, like maintaining cell size and volume, generating the action potential, exchanging nutrients and gases, etc. Membrane transport can be either passive or active. It can be simple diffusion, facilitated, or mediated transport aided by transport proteins such as transporters and channels.
Transporters facilitate either an active or passive movement of solutes. They can allow a single-molecule transport down its...
Membrane Asymmetry Regulating Transporters01:19

Membrane Asymmetry Regulating Transporters

Enzymes like flippase, floppase, and scramblase transfer phospholipids from one layer to another in the membrane, thereby affecting membrane asymmetry.
Flippase
Eukaryotic flippases are type-IV P-type ATPases or P4-ATPases belonging to P-type ATPase family proteins that are membrane-bound pumps involved in the ATP-mediated transport of ions and molecules across the membrane. Flippases flip specific phospholipids from the outer to the inner leaflet of a membrane. All P4-ATPases have one...
Membrane Transporters01:31

Membrane Transporters

Transporters are essential membrane transport proteins with functions related to cell nutrition, homeostasis, communication, etc. Approximately 7% of all genes in the human genome code for transporters or transporter-related proteins.
Transporters are mainly composed of alpha-helices, built from bundles of ten or more helices traversing the plasma membrane. The solute-binding sites are located midway, where some of the helices are broken or distorted, making space for the binding site through...
Secondary Active Transport01:32

Secondary Active Transport

One example of how cells use the energy contained in electrochemical gradients is demonstrated by glucose transport into cells. The ion vital to this process is sodium (Na+), which is typically present in higher concentrations extracellularly than in the cytosol. Such a concentration difference is due, in part, to the action of an enzyme "pump" embedded in the cellular membrane that actively expels Na+ from a cell. Importantly, as this pump contributes to the high concentration of...

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Related Experiment Video

Updated: Jul 17, 2026

A Step-by-step Method for the Reconstitution of an ABC Transporter into Nanodisc Lipid Particles
12:25

A Step-by-step Method for the Reconstitution of an ABC Transporter into Nanodisc Lipid Particles

Published on: August 31, 2012

Computer simulations of ABC transporter components.

Eliud O Oloo1, Christian Kandt, Megan L O'Mara

  • 1Department of Biological Sciences, University of Calgary, 2500 University Dr. NW, Calgary, AB T2N 1N4, Canada.

Biochemistry and Cell Biology = Biochimie Et Biologie Cellulaire
|January 12, 2007
PubMed
Summary

Computer simulations reveal insights into ATP-binding cassette (ABC) transporters, aiding the study of protein dynamics and interactions. These methods advance understanding of complex biological transport mechanisms.

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ABCG5/G8 Crystallization in a Lipidic Bicelle Environment for X-Ray Crystallography
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ABCG5/G8 Crystallization in a Lipidic Bicelle Environment for X-Ray Crystallography

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Real Time Measurements of Membrane Protein:Receptor Interactions Using Surface Plasmon Resonance (SPR)
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Real Time Measurements of Membrane Protein:Receptor Interactions Using Surface Plasmon Resonance (SPR)

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Last Updated: Jul 17, 2026

A Step-by-step Method for the Reconstitution of an ABC Transporter into Nanodisc Lipid Particles
12:25

A Step-by-step Method for the Reconstitution of an ABC Transporter into Nanodisc Lipid Particles

Published on: August 31, 2012

ABCG5/G8 Crystallization in a Lipidic Bicelle Environment for X-Ray Crystallography
06:47

ABCG5/G8 Crystallization in a Lipidic Bicelle Environment for X-Ray Crystallography

Published on: August 25, 2023

Real Time Measurements of Membrane Protein:Receptor Interactions Using Surface Plasmon Resonance (SPR)
09:35

Real Time Measurements of Membrane Protein:Receptor Interactions Using Surface Plasmon Resonance (SPR)

Published on: November 29, 2014

Area of Science:

  • Biochemistry
  • Computational Biology
  • Structural Biology

Background:

  • Computer simulations are vital for studying protein structure and dynamics.
  • ATP-binding cassette (ABC) transporters are crucial for active transport but their mechanism is poorly understood.

Purpose of the Study:

  • To illustrate progress and challenges in computer modeling of proteins, focusing on ABC transporters.
  • To highlight the application of computational techniques in understanding protein function.

Main Methods:

  • Molecular dynamics simulations using high-resolution crystal structures.
  • Homology-based computational methods for predicting protein structures.

Main Results:

  • Simulations provide insights into conformational coupling events driving ABC transporter function.
  • Computational methods successfully predicted structures of medically relevant ABC transporters like P-glycoprotein.

Conclusions:

  • Computer modeling offers a powerful approach to elucidate the functional mechanisms of ABC transporters.
  • These techniques are broadly applicable to understanding protein mechanisms at an atomic level.