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Early Viral Entry Assays for the Identification and Evaluation of Antiviral Compounds
Published on: October 29, 2015
Molecular characterization of enteroviruses isolated from patients with aseptic meningitis in Korea, 2005
1Department of Laboratory Medicine, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Korea.
Abstract:
Enteroviruses are the most common causative agents of aseptic meningitis. In 2005, an outbreak of aseptic meningitis occurred in Seoul, Korea, which appeared to be caused by certain enterovirus strains. This study analyzed the clinical isolates from 24 different aseptic meningitis patients at our center from January to September 2005. Serotyping using type-specific antisera, RT-PCR, and direct sequencing of the 5' noncoding and VP1 regions were carried out. The serotyping study identified 15 coxsackievirus B5 (CBV5), 4 coxsackievirus B1 (CBV1), 1 coxsackievirus B3 (CBV3) and 4 echovirus 9 (ECV9). Phylogenic analysis of the VP1 region revealed CBV5 to be the most predominant strain (15 strains). Twelve of these strains were grouped together with recent strains isolated in China and France. The 12 CBV5 strains contained a novel amino acid change in the BC-loop (the 90th and 91st, AY --> GN) compared to the reference strain (1954/UK/85). The amino acid changes in the BC-loop in some recent CBV5 strains tend to be located in the C-terminal part, and these changes suggest some antigenic significance.
Insights
A 2005 Seoul aseptic meningitis outbreak was primarily caused by coxsackievirus B5 (CBV5) strains. Phylogenetic analysis revealed novel amino acid changes in CBV5 strains, suggesting potential antigenic significance.
Area of Science:
- Virology
- Epidemiology
- Molecular Biology
Background:
- Enteroviruses are primary causes of aseptic meningitis.
- An aseptic meningitis outbreak occurred in Seoul, Korea, in 2005, linked to enterovirus strains.
Purpose of the Study:
- To analyze clinical isolates from aseptic meningitis patients during the 2005 Seoul outbreak.
- To identify and characterize the predominant enterovirus strains responsible for the outbreak.
Main Methods:
- Serotyping using type-specific antisera.
- Reverse transcription-polymerase chain reaction (RT-PCR).
- Direct sequencing of 5' noncoding and VP1 regions.
Main Results:
- Coxsackievirus B5 (CBV5) was the predominant strain (15/24 isolates).
- Phylogenetic analysis of the VP1 region confirmed CBV5 predominance and grouped 12 strains with recent isolates from China and France.
- Twelve CBV5 strains exhibited a novel amino acid change (AY to GN) in the BC-loop compared to the reference strain.
Conclusions:
- Coxsackievirus B5 was the main etiological agent during the 2005 Seoul aseptic meningitis outbreak.
- The identified amino acid changes in the CBV5 BC-loop may have antigenic implications and warrant further investigation.
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