Building and evaluating annotated corpora for medical NLP systems
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Updated: Jul 17, 2026

Augmenting Large Language Models via Vector Embeddings to Improve Domain-Specific Responsiveness
Published on: December 6, 2024
Philip V Ogren1, Guergana Savova, James D Buntrock
1Mayo Clinic, Rochester, MN, USA.
Abstract:
We report efforts from a pilot annotation project in which we annotated sixty clinical notes with disorder mentions. Four retrieval experts annotated the same clinical notes so that four-way inter-annotator agreement could be calculated. We find the inter-annotator agreement results encouraging to scale up the project using the same guidelines and annotation schema.
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