Phage 3396 from a Streptococcus dysgalactiae subsp. equisimilis pathovar may have its origins in streptococcus

Mark R Davies1, David J McMillan, Gary H Van Domselaar

  • 1Bacterial Pathogenesis Laboratory, Queensland Institute of Medical Research, Brisbane, Queensland 4006, Australia.

Journal of Bacteriology
|January 30, 2007
PubMed

Insights

Bacteriophages significantly impact streptococcal genetic diversity and pathogenicity. This study reveals the first genome of a group G streptococcus phage, Phi3396, highlighting extensive gene transfer and its role in streptococcal population structure.

Area of Science:

  • Microbiology
  • Genomics
  • Bacteriophage Research

Background:

  • Streptococcus dysgalactiae subsp. equisimilis (GGS) are commensals related to the pathogen Streptococcus pyogenes (GAS).
  • Bacteriophages are known to drive genotypic diversity and pathogenicity in GAS.
  • The role of phages in GGS population dynamics remains largely unexplored.

Purpose of the Study:

  • To characterize the first complete genome sequence of a GGS-derived bacteriophage.
  • To investigate the genetic diversity and dissemination of streptococcal phages.
  • To understand the implications for GGS and GAS population structures and pathogenicity.

Main Methods:

  • Whole-genome sequencing of the GGS phage Phi3396.
  • Comparative genomic analysis with known streptococcal phages, particularly GAS phages.
  • Identification of phage homologues in GAS clinical isolates.

Main Results:

  • The complete genome of Phi3396, a GGS phage, was sequenced.
  • Phi3396 exhibits a chimeric structure with high homology to GAS phage Phi315.1, indicating extensive gene transfer.
  • Homologues of Phi3396 were identified in GAS strains from an endemic infection region.

Conclusions:

  • Phages play a crucial role in the genetic diversity and evolution of both GGS and GAS.
  • Evidence suggests ongoing genetic exchange and dissemination of streptococcal phages in nature.
  • Understanding phage-host interactions is key to deciphering streptococcal population structures and the emergence of pathogenic variants.

Related Concept Videos

Streptococcal Pharyngitis01:27

Streptococcal Pharyngitis

Streptococcal pharyngitis, commonly known as “strep throat,” is an acute infection of the oropharyngeal tissues caused by the Gram‑positive Group A Streptococcus (Streptococcus pyogenes). Transmission occurs primarily through respiratory droplets expelled during coughing, sneezing, or talking.Mechanisms of Host Entry and Immune EvasionUpon entering the host, S. pyogenes adheres to the mucosal epithelial cells of the pharynx via surface proteins, notably lipoteichoic acid and the antiphagocytic...
Lysogenic Cycle of Bacteriophages00:43

Lysogenic Cycle of Bacteriophages

In contrast to the lytic cycle, phages infecting bacteria via the lysogenic cycle do not immediately kill their host cell. Instead, they combine their genome with the host genome, allowing the bacteria to replicate the phage DNA along with the bacterial genome. The incorporated copy of the phage genome is called the prophage. Some prophages can re-activate and enter the lytic cycle. This often occurs in response to a perturbation, such as DNA damage, but can also transpire in the absence of...
DNA Bacteriophages01:26

DNA Bacteriophages

Bacteriophages, or phages, are viruses that specifically infect bacteria, utilizing their genetic material to hijack host cellular machinery for replication. DNA bacteriophages employ single-stranded DNA (ssDNA) or double-stranded DNA (dsDNA) genomes. These phages exhibit diverse replication strategies and host interactions, influencing their ecological roles and applications in biotechnology and medicine.ssDNA BacteriophagesssDNA phages, with their small genomes, utilize unique strategies to...
Bacteriophages of the Human Virome01:23

Bacteriophages of the Human Virome

Bacteriophages are found throughout the human body. They may even outnumber eukaryotic viruses, forming an important and dynamic component of the human virome. Indeed, phages represent the most abundant viral entities, with densities in the gut reaching up to 10⁹ particles per gram of fecal matter, and many belonging to orders such as Caudovirales and Microviridae, while a substantial proportion remains unclassified as viral “dark matter.”Lysogeny and Genetic ExchangeIn the gut, bacteriophages...
Viral Replication: Lysogenic Cycle01:16

Viral Replication: Lysogenic Cycle

The lysogenic cycle is a crucial viral replication strategy that allows bacteriophages to persist within host cells without immediately destroying them. This process is primarily observed in temperate phages, such as bacteriophage lambda (λ), which infects Escherichia coli. The cycle allows the viral genome to persist across bacterial generations while keeping host cells viable.Integration of the Viral GenomeUpon infection, bacteriophage lambda attaches to the bacterial surface and injects its...
Lytic Cycle of Bacteriophages01:30

Lytic Cycle of Bacteriophages

Bacteriophages, also known as phages, are specialized viruses that infect bacteria. A key characteristic of phages is their distinctive “head-tail” morphology. A phage begins the infection process (i.e., lytic cycle) by attaching to the outside of a bacterial cell. Attachment is accomplished via proteins in the phage tail that bind to specific receptor proteins on the outer surface of the bacterium. The tail injects the phage’s DNA genome into the bacterial cytoplasm. In the lytic replication...