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Updated: Jul 17, 2026

An Organotypic High Throughput System for Characterization of Drug Sensitivity of Primary Multiple Myeloma Cells
Published on: July 15, 2015
A novel platform for accelerated pharmacodynamic profiling for lead optimization of anticancer drug candidates
Jeffrey Szwaya1, Charles Bruseo, Enkeleda Nakuci
1ArQule Inc, Department of Molecular Oncology, Woburn, MA 01801, USA.
Abstract:
Oncology drug discovery is, by definition, a target-rich enterprise. High-throughput screening (HTS) laboratories have supported a wide array of molecularly targeted and chemical genomic approaches for anticancer lead generation, and the number of hits emerging from such campaigns has increased dramatically. Although automation of HTS processes has eliminated primary screening as a bottleneck, the demands on secondary screening in appropriate cell-based assays have increased concomitantly with the numbers of hits delivered to therapeutic area laboratories. The authors describe herein the implementation of a novel platform using off-the-shelf solutions that have allowed them to efficiently characterize hundreds of HTS hits using a palette of Western blot-based pharmacodynamic assays. The platform employs a combination of a flatbed bufferless SDS-PAGE system, a dry ultra-rapid electroblotting apparatus, and a highly sensitive and quantitative infrared imaging system. Cumulatively, this platform has significantly reduced the cycle time for HTS hit evaluation. In addition, the routine use of this platform has resulted in higher quality data that have allowed the development of structure-activity databases that have tangibly improved lead optimization. The authors describe in detail the application of this platform, designated the Accelerated Pharmaco-Dynamic Profiler (APDP), to the annotation of inhibitors of 2 attractive oncology targets, BRAF kinase and Hsp90.
Insights
A new platform accelerates oncology drug discovery by efficiently characterizing hundreds of high-throughput screening (HTS) hits using Western blot assays. This innovation improves lead optimization and data quality for anticancer drug development.
Area of Science:
- Biochemistry
- Molecular Biology
- Drug Discovery
Background:
- Oncology drug discovery relies heavily on high-throughput screening (HTS) for identifying anticancer leads.
- Increased HTS efficiency has led to a bottleneck in secondary screening and pharmacodynamic profiling.
- Characterizing numerous HTS hits requires robust and efficient assay platforms.
Purpose of the Study:
- To implement a novel platform for efficient characterization of HTS hits using Western blot-based pharmacodynamic assays.
- To reduce the cycle time for HTS hit evaluation in oncology drug discovery.
- To improve the quality of data for lead optimization through structure-activity relationship development.
Main Methods:
- Development and implementation of the Accelerated Pharmaco-Dynamic Profiler (APDP) platform.
- Utilizing a flatbed bufferless SDS-PAGE system, dry ultra-rapid electroblotting, and infrared imaging.
- Application of the APDP to annotate inhibitors of BRAF kinase and Hsp90.
Main Results:
- Significant reduction in the cycle time for HTS hit evaluation.
- Generation of higher quality data enabling improved lead optimization.
- Successful annotation of inhibitors for key oncology targets, BRAF kinase and Hsp90.
Conclusions:
- The APDP platform offers an efficient solution for characterizing HTS hits in oncology drug discovery.
- This platform enhances data quality and accelerates the development of structure-activity databases.
- The APDP facilitates the identification and optimization of novel anticancer therapeutics.
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