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Published on: August 20, 2019
Genetic variants of surfactant proteins A, B, C, and D in bronchopulmonary dysplasia
J Pavlovic1, C Papagaroufalis, M Xanthou
1Department of Cellular and Molecular Physiology, PSU, Hershey, PA 17033, USA.
Insights
Genetic variants in surfactant proteins (SPs) are linked to Bronchopulmonary Dysplasia (BPD), a respiratory disease in premature infants. Specific SP-B alleles and SP-A/SP-D haplotypes show significant associations with BPD susceptibility and protection.
Area of Science:
- Genetics
- Neonatology
- Respiratory Medicine
Background:
- Bronchopulmonary Dysplasia (BPD) affects prematurely born infants requiring respiratory support.
- Genetic factors may influence BPD development, particularly in relation to lung development and repair.
Purpose of the Study:
- To investigate if genetic variants of surfactant proteins (SPs) and SP-B-linked microsatellites are risk factors for BPD.
- To analyze associations between SP genetic loci and BPD subtypes (BPD_28D and BPD_36W).
Main Methods:
- Family-based association study in a Greek cohort of 71 neonates (<30 weeks gestational age).
- Genotyping using pyrosequencing and established methods.
- Statistical analysis using Transmission Disequilibrium Test (TDT) and Family Based Association Test (FBAT).
Main Results:
- Significant associations (p<=0.01) found for SP-B alleles and SP-B-linked microsatellite markers.
- Allele B-18_C linked to BPD_36W susceptibility; AAGG_6 linked to BPD_28D/36W susceptibility.
- Ten susceptibility and one protective haplotype for SP-B/microsatellites; two protective haplotypes for SP-A-SP-D identified.
Conclusions:
- Surfactant protein loci are associated with Bronchopulmonary Dysplasia.
- Further studies with larger cohorts are needed to confirm these genetic links and understand BPD subgroups.
Abstract:
BPD_28D (O2 dependency at 28 days of life) and BPD_36W (O2 dependency at 36 wks post-menstrual age) are diseases of prematurely born infants exposed to mechanical ventilation and/or oxygen supplementation. In order to determine whether genetic variants of surfactant proteins (SPs-A, B, C, and D) and SP-B-linked microsatellite markers are risk factors in BPD, we performed a family based association study using a Greek study group of 71 neonates (<30 wks gestational age) from 60 families with, 52 BPD_28D and 19 BPD_36W, affected infants. Genotyping was performed using newly designed pyrosequencing assays and previously published methods. Associations between genetic variants of SPs and BPD subgroups were determined using Transmission Disequilibrium Test (TDT) and Family Based Association Test (FBAT). Significant associations (p
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