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Genomic MRI - a Public Resource for Studying Sequence Patterns within Genomic DNA
Published on: May 9, 2011
On the length of the longest exact position match in a random sequence
Gesine Reinert1, Michael S Waterman
1Keble College and Department of Statistics, University of Oxford, UK. reinert@stats ox.ac.uk
IEEE/ACM Transactions on Computational Biology and Bioinformatics
|February 6, 2007
Abstract:
A mixed Poisson approximation and a Poisson approximation for the length of the longest exact match of a random sequence across another sequence are provided, where the match is required to start at position 1 in the first sequence. This problem arises when looking for suitable anchors in whole genome alignments.
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