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Updated: Jul 17, 2026

Measuring Microbial Mutation Rates with the Fluctuation Assay
Published on: November 28, 2019
Fluoroquinolone resistance in Haemophilus influenzae is associated with hypermutability
María Pérez-Vázquez1, Federico Román, Silvia García-Cobos
1Antibiotic Laboratory, Bacteriology Service, Centro Nacional de Microbiología, Instituto de Salud Carlos III, 28220 Majadahonda, Madrid, Spain.
Abstract:
Forty-three percent (12/28) of ciprofloxacin (CIP)-nonsusceptible respiratory isolates of Haemophilus influenzae were hypermutable, compared with 8.5% (3/35) in the CIP-susceptible control group (P=0.002). CIP-nonsusceptible mutants were obtained with hypermutable strains only; these mutants developed three resistance mechanisms in a step-by-step process: target modifications, loss of a porin protein, and increased efflux.
Insights
A significant proportion of ciprofloxacin-nonsusceptible Haemophilus influenzae respiratory isolates are hypermutable. These hypermutable strains are crucial for developing multi-step resistance mechanisms to fluoroquinolone antibiotics.
Area of Science:
- Microbiology
- Antimicrobial Resistance
- Genetics
Background:
- Ciprofloxacin (CIP) resistance in Haemophilus influenzae is a growing concern.
- Hypermutability is a known factor contributing to antimicrobial resistance.
- Understanding resistance mechanisms is vital for effective treatment strategies.
Purpose of the Study:
- To investigate the prevalence of hypermutability in ciprofloxacin-nonsusceptible Haemophilus influenzae.
- To explore the resistance mechanisms developed by these nonsusceptible strains.
Main Methods:
- Comparative analysis of ciprofloxacin-susceptible and -nonsusceptible Haemophilus influenzae isolates.
- Identification and characterization of resistance mechanisms in developed mutants.
Main Results:
- Forty-three percent of ciprofloxacin-nonsusceptible isolates were hypermutable, significantly higher than the 8.5% in susceptible isolates (P=0.002).
- Ciprofloxacin-nonsusceptible mutants were exclusively derived from hypermutable strains.
- A three-step resistance development process was observed: target modification, porin loss, and increased efflux.
Conclusions:
- Hypermutability is strongly associated with ciprofloxacin nonsusceptibility in Haemophilus influenzae.
- Hypermutable strains facilitate the stepwise acquisition of multiple resistance mechanisms.
- These findings highlight the importance of monitoring hypermutability in clinical settings to predict and manage fluoroquinolone resistance.
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