Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Experiment Videos

Gaussian induced dipole polarization model.

Dennis Elking1, Tom Darden, Robert J Woods

  • 1Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30607, USA.

Journal of Computational Chemistry
|February 15, 2007
PubMed
Summary
This summary is machine-generated.

Related Concept Videos

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Glycoproteomic and genetic analysis of N-glycosylation of complement component C3 reveals immune pathway regulation.

Genome biology·2026
Same author

Minding the gap: collective determinants of multiscale structure across interacting bacterial colonies.

bioRxiv : the preprint server for biology·2026
Same author

Generating 3D models of complex carbohydrates with GLYCAM-Web.

Nature methods·2026
Same author

Crystal structure of <i>Vibrio cholerae</i> polysaccharide lyase RbmB bound to <i>Vibrio</i> polysaccharide (VPS) fragments provides insights into substrate recognition and cleavage.

Proceedings of the National Academy of Sciences of the United States of America·2026
Same author

GLYCAM Bacterial Carbohydrate Builder: a web-tool for modelling 3D structures of bacterial glycans.

bioRxiv : the preprint server for biology·2026
Same author

Exploring Diffusion and Aggregation Behaviors in Carbohydrate Solutions.

The journal of physical chemistry. B·2026
Same journal

Electric-Field Effects on Structure and Conductance in a Cytochrome b<sub>562</sub> Junction.

Journal of computational chemistry·2026
Same journal

Quantum Chemistry Study of Luminescence Quenching in the Eu<sup>3+</sup>@UiO-67 Sensor Induced by Ag<sup>+</sup> Ions.

Journal of computational chemistry·2026
Same journal

Projection-Modified Direct Inversion in the Iterative Subspace: A Memory-Efficient Convergence Method for the Extended Molecular Ornstein-Zernike Theory.

Journal of computational chemistry·2026
Same journal

PES2MP: A Python Application for Automating Collisional Dynamics of Linear Rigid-Rotors.

Journal of computational chemistry·2026
Same journal

The Anionic States of Ubiquinone Characterized by Second-Order Approximate Coupled-Cluster Theory.

Journal of computational chemistry·2026
Same journal

Hydrogen Bond Energy Estimation in Large Molecular Clusters via the Method of Synergistic Cyclic Cooperativity: A Software Update H-BEE 2.0.

Journal of computational chemistry·2026
See all related articles

A novel Gaussian polarization model offers improved short-distance interactions and accuracy in predicting molecular polarizability tensors compared to existing models. This method also enhances electrostatic calculations and parameterization for greater precision.

Area of Science:

  • Computational Chemistry
  • Quantum Chemistry
  • Molecular Modeling

Background:

  • Accurate modeling of molecular polarizability is crucial for understanding chemical interactions.
  • Existing induced dipole models, like the point dipole and damped Thole models, have limitations at short distances and in parameterization accuracy.

Purpose of the Study:

  • To introduce a new induced dipole polarization model based on interacting Gaussian charge densities.
  • To compare the performance of the Gaussian polarization model against established models.
  • To present a novel method for parameterizing polarizabilities.

Main Methods:

  • Development of a Gaussian polarization model using interacting Gaussian charge densities.
  • Comparative analysis of the Gaussian, damped Thole, and point dipole models.

Related Experiment Videos

  • Parameterization of polarizabilities by probing molecules with point charges and fitting to electrostatic potential.
  • Main Results:

    • The Gaussian polarization model demonstrates finite interactions at short distances, overcoming a key limitation of point dipole models.
    • The Gaussian model shows slightly improved performance over the damped Thole model in fitting molecular polarizability tensors.
    • Probed polarizabilities derived from electrostatic potential fitting are more accurate and conformationally transferable than generic atom type polarizabilities.

    Conclusions:

    • The Gaussian polarization model offers a robust alternative for calculating induced dipole polarization with enhanced accuracy and applicability.
    • The developed parameterization method provides a more accurate and transferable approach for molecular polarizabilities.
    • The Gaussian model's framework facilitates generalization to other multipole moments and improved electrostatic damping.