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Updated: Jul 16, 2026

Engineering Artificial Factors to Specifically Manipulate Alternative Splicing in Human Cells
Published on: April 26, 2017
The gene encoding the splicing factor SF2/ASF is a proto-oncogene
Rotem Karni1, Elisa de Stanchina, Scott W Lowe
1Cold Spring Harbor Laboratory, PO Box 100, Cold Spring Harbor, New York 11724, USA.
Abstract:
Alternative splicing modulates the expression of many oncogene and tumor-suppressor isoforms. We have tested whether some alternative splicing factors are involved in cancer. We found that the splicing factor SF2/ASF is upregulated in various human tumors, in part due to amplification of its gene, SFRS1. Moreover, slight overexpression of SF2/ASF is sufficient to transform immortal rodent fibroblasts, which form sarcomas in nude mice. We further show that SF2/ASF controls alternative splicing of the tumor suppressor BIN1 and the kinases MNK2 and S6K1. The resulting BIN1 isoforms lack tumor-suppressor activity; an isoform of MNK2 promotes MAP kinase-independent eIF4E phosphorylation; and an unusual oncogenic isoform of S6K1 recapitulates the transforming activity of SF2/ASF. Knockdown of either SF2/ASF or isoform-2 of S6K1 is sufficient to reverse transformation caused by the overexpression of SF2/ASF in vitro and in vivo. Thus, SF2/ASF can act as an oncoprotein and is a potential target for cancer therapy.
Insights
The splicing factor SF2/ASF, when overexpressed, acts as an oncoprotein driving cancer development by altering tumor suppressor and kinase splicing. Targeting SF2/ASF offers a potential cancer therapy strategy.
Area of Science:
- Molecular Biology
- Oncology
- Gene Regulation
Background:
- Alternative splicing significantly impacts the expression of oncogenes and tumor suppressors.
- The role of alternative splicing factors in cancer development remains an area of active investigation.
Purpose of the Study:
- To investigate the involvement of splicing factors in cancer.
- To determine if SF2/ASF functions as an oncoprotein and explore its therapeutic potential.
Main Methods:
- Analysis of SF2/ASF expression in human tumors.
- Cell transformation assays using rodent fibroblasts.
- Investigation of SF2/ASF's control over alternative splicing of BIN1, MNK2, and S6K1.
- In vitro and in vivo knockdown experiments.
Main Results:
- SF2/ASF (Splicing Factor 2/Alternative Splicing) is upregulated in human tumors, partly due to SFRS1 gene amplification.
- SF2/ASF overexpression transforms rodent fibroblasts into sarcoma-forming cells.
- SF2/ASF regulates splicing of BIN1, MNK2, and S6K1, generating isoforms with altered functions.
- Knockdown of SF2/ASF or S6K1 isoform 2 reverses oncogenic transformation.
Conclusions:
- SF2/ASF functions as an oncoprotein by manipulating alternative splicing pathways.
- SF2/ASF-driven oncogenesis involves specific isoforms of BIN1, MNK2, and S6K1.
- SF2/ASF represents a promising therapeutic target for various cancers.
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