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Updated: Jul 16, 2026

Quantitative PCR-based Assay to Measure Sonic Hedgehog Signaling in Cellular Model of Ciliogenesis
Published on: January 31, 2025
Multiple ubiquitin-dependent processing pathways regulate hedgehog/gli signaling: implications for cell development
Lucia Di Marcotullio1, Elisabetta Ferretti, Azzura Greco
1Department of Experimental Medicine and Pathology, Cenci Bolognetti Foundation, University La Sapienza, Roma, Italy.
Abstract:
Hedgehog pathway is crucial for the maintenance and self-renewal of neural stem cells and for tumorigenesis. Hedgehog signaling is limited by multiple E3 ubiquitin ligases that process the downstream transcription factors Gli. Cullin family-based ubiquitination results in either Cullin1-Slimb/betaTrCP- or Cullin3-HIB/Roadkill/SPOP-dependent proteolytic processing or degradation of Drosophila Cubitus interruptus or mammalian Gli proteins. We have recently identified Itch as an additional HECT family E3 ligase, able to ubiquitinate and degrade Gli1. A functional link with the influence of Hedgehog signaling on cell development and tumorigenesis is suggested by the identification of Numb as a promoter of such an Itch-dependent ubiquitination process that leads to Gli1 degradation, thus suppressing its transcriptional function. Numb is an evolutionary conserved developmental protein that, during progenitor division, asymmetrically segregates to daughter cells thereby determining distinct binary cell fates. Numb is downregulated in cerebellar progenitors and their malignant derivatives (i.e. medulloblastoma cells). Furthermore, Numb has anti-proliferative and pro-differentiation effects on both cerebellar progenitors and medulloblastoma cells, due to its suppression of functional Gli1. These findings unveil a novel Numb/Itch-dependent regulatory loop that limits the extent and duration of Hedgehog signaling during neural progenitor differentiation. Its subversion emerges as a relevant event in brain tumorigenesis.
Insights
Numb and Itch E3 ligase form a regulatory loop that limits Hedgehog signaling in neural stem cells. This pathway
Area of Science:
- Molecular Biology
- Developmental Biology
- Neuroscience
- Oncology
Background:
- The Hedgehog signaling pathway is essential for neural stem cell maintenance and tumorigenesis.
- E3 ubiquitin ligases regulate Gli transcription factors, controlling Hedgehog pathway activity.
- Previous studies identified Cullin-based ligases; the HECT family ligase Itch is a new player.
Purpose of the Study:
- To investigate the role of the HECT family E3 ligase Itch in regulating Hedgehog signaling.
- To identify novel regulators of Gli1 degradation and their impact on neural development and brain tumors.
- To elucidate the function of Numb in the context of Hedgehog signaling and medulloblastoma.
Main Methods:
- Identification of Itch as an E3 ligase targeting Gli1 for ubiquitination and degradation.
- Characterization of Numb's role in promoting Itch-dependent Gli1 ubiquitination.
- Analysis of Numb expression and function in cerebellar progenitors and medulloblastoma cells.
Main Results:
- Itch directly ubiquitylates and degrades Gli1, a key downstream effector of Hedgehog signaling.
- Numb promotes Itch-mediated Gli1 degradation, suppressing Gli1's transcriptional activity.
- Numb downregulation in cerebellar progenitors correlates with medulloblastoma and loss of its anti-proliferative effects.
Conclusions:
- A novel Numb/Itch-dependent regulatory loop limits Hedgehog signaling during neural progenitor differentiation.
- This regulatory loop suppresses Gli1 activity, exerting anti-proliferative and pro-differentiation effects.
- Subversion of the Numb/Itch pathway is implicated in brain tumorigenesis, particularly medulloblastoma.
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