Gene expression profiling of cutaneous wound healing

Kavita Deonarine1, Monica C Panelli, Mitchell E Stashower

  • 1Immunogenetics Section, Department of Transfusion Medicine, Clinical Center National Institutes of Health, Bethesda, MD 20892, USA. kavitasoleil@yahoo.com

Abstract

Insights

This study reveals that wound healing involves an initial inflammatory gene response followed by genes promoting repair and angiogenesis. Macrophage populations shift from mixed M1/M2 to predominantly M2, driving this transition.

Area of Science:

  • Dermatology
  • Molecular Biology
  • Immunology

Background:

  • Wound repair is a complex biological process not fully understood at the molecular level.
  • Genome-wide transcriptional analysis offers a powerful tool to investigate this process comprehensively.

Purpose of the Study:

  • To elucidate the transcriptional changes during the early stages of wound healing.
  • To identify gene signatures associated with inflammation, repair, and angiogenesis in response to topical treatment.

Main Methods:

  • A placebo-controlled, double-blind clinical trial involving patients with basal cell carcinoma.
  • Topical application of imiquimod (toll-like receptor 7 agonist) or vehicle cream.
  • Skin punch biopsies analyzed using 17.5K cDNA microarrays at multiple time points (0, 2, 4, 8 days).

Main Results:

  • Four distinct gene expression signatures were identified.
  • An increase in inflammatory genes was observed throughout the study.
  • Early biopsies showed pro-inflammatory genes and M1/M2 macrophage markers, while later biopsies revealed repair, angiogenesis genes, and predominantly M2 markers.

Conclusions:

  • Cutaneous wound healing initiates with strong pro-inflammatory transcriptional activation.
  • This is followed by a transition to angiogenesis and remodeling, potentially mediated by a shift to M2 macrophages.
  • Understanding this inflammatory-to-repair transition is crucial for interpreting molecular events in wound healing.

Related Concept Videos

What is Gene Expression?01:42

What is Gene Expression?

Overview
Gene expression is the process in which DNA directs the synthesis of functional products, that is, proteins. Cells can regulate gene expression at various stages. It allows organisms to generate different cell types and enables cells to adapt to internal and external factors.
Genetic Information Flows from DNA to RNA to Protein
A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is made up of nucleotides and proteins consist of amino...
194.9K
What is Gene Expression?01:36

What is Gene Expression?

A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is comprised  of nucleotides and proteins are comprised of amino acids, a mediator is required to convert the information encoded in DNA into proteins. This mediator is the messenger RNA (mRNA). mRNA copies the blueprint from DNA by a process called transcription. In eukaryotes, transcription occurs in the nucleus by complementary base-pairing with the DNA template. The mRNA is then...
11.1K
Cell Specific Gene Expression01:58

Cell Specific Gene Expression

Multicellular organisms contain a variety of structurally and functionally distinct cell types, but the DNA in all the cells originated from the same parent cells. The differences in the cells can be attributed to the differential gene expression. Liver cells, whose functions include detoxification of blood, production of bile to metabolize fats, and synthesis of proteins essential for metabolism, must express a specific set of genes to perform their functions. Gene expression also varies with...
16.3K
Cell Specific Gene Expression01:58

Cell Specific Gene Expression

No description available
5.4K
Chromatin Position Affects Gene Expression02:35

Chromatin Position Affects Gene Expression

Chromatin is the massive complex of DNA and proteins packaged inside the nucleus. The complexity of chromatin folding and how it is packaged inside the nucleus greatly influences  access to genetic information. Generally, the nucleus' periphery is considered transcriptionally repressive, while the cell's interior is considered a transcriptionally active area. 
Topologically Associated Domains (TADs)
The 3-dimensional positioning of chromatin in the nucleus influences the...
24.7K