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Updated: Jul 16, 2026

Gastric Mucosa Quantitative Polymerase Chain Reaction Analysis for Detecting Helicobacter pylori and Antibiotic Resistance
Published on: March 7, 2025
Helicobacter pylori culture and antimicrobial resistance in Iran
Gholam-Hossein Fallahi1, Shohreh Maleknejad
1Department of Gastroenterology, Children Medical Centre, Tehran University of Medical Science, Tehran, Iran. ocrt@sina.tums.ac.ir
Objective:
Helicobacter pylori is considered as an important etiologic factor in pathogenesis of peptic ulcer disease, chronic gastritis and gastric cancer. To eradicate this micro-organism, numerous regimens containing various antimicrobial agents have been suggested. However, H pylori antimicrobial resistance is a leading factor to treatment failure and recurrence of the disease. The aim of the study was to evaluate the prevalence of H pylori resistance to metronidazole, clarithromycin, tetracycline, amoxicillin, erythromycin and furazolidone in authors pediatric patients.
Methods:
Antral biopsy of all pediatric patients with negative history of receiving anti-H pylori regimen and endoscopic findings of nodular gastritis or peptic ulcer without previous history of NSAID consumption, burning and trauma were performed for H pylori histology, urease test and culture. All positive cultures were tested for antimicrobial susceptibility.
Results:
Twenty four patients (14 male and 10 female) between 3.5 and 14 years of age were culture positive. 54.16% of the isolates were resistant to metronidazole, 8.33% to amoxicillin, 4.16% to erythromycin and 4.16% to clarithromycin. None of authors patients were resistant to tetracycline and furazolidone.
Conclusion:
H. pylori antimicrobial resistance could be a major contributor to failure of H pylori eradication. Continuous prospective surveillance of H. Pylori is essential. Moreover, culture and antimicrobial susceptibility test is recommended for resistant cases after the first failure to therapy.
Insights
High rates of Helicobacter pylori resistance to metronidazole were found in pediatric patients, impacting treatment success. This highlights the need for ongoing surveillance and susceptibility testing for H. pylori infections.
Area of Science:
- Pediatric Gastroenterology
- Infectious Diseases
- Microbiology
Background:
- Helicobacter pylori is a significant cause of peptic ulcer disease, gastritis, and gastric cancer.
- Antimicrobial resistance in H. pylori is a primary reason for treatment failure and disease recurrence.
- Effective eradication regimens are crucial for managing H. pylori-associated conditions.
Purpose of the Study:
- To determine the prevalence of H. pylori resistance to key antibiotics in pediatric patients.
- To assess resistance patterns for metronidazole, clarithromycin, tetracycline, amoxicillin, erythromycin, and furazolidone.
Main Methods:
- Antral biopsies were collected from pediatric patients with specific endoscopic findings and no prior H. pylori treatment.
- H. pylori detection was performed using histology, urease testing, and culture.
- Antimicrobial susceptibility testing was conducted on all positive H. pylori cultures.
Main Results:
- Twenty-four pediatric patients (ages 3.5-14) had culture-positive H. pylori.
- High resistance rates were observed: 54.16% to metronidazole, 8.33% to amoxicillin, 4.16% to erythromycin, and 4.16% to clarithromycin.
- No resistance was found to tetracycline or furazolidone in the studied isolates.
Conclusions:
- H. pylori antimicrobial resistance is a significant factor in eradication failure.
- Continuous surveillance of H. pylori resistance patterns is essential.
- Culture and susceptibility testing are recommended for pediatric patients experiencing treatment failure.
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