Related Experiment Video
Updated: Jul 16, 2026

Analyzing and Building Nucleic Acid Structures with 3DNA
Published on: April 26, 2013
Exploring DNA structure with Cn3D
Sandra G Porter1, Joseph Day, Richard E McCarty
1Geospiza, Inc., Seattle, WA 98107, USA. sandy@geospiza.com
Abstract:
Researchers in the field of bioinformatics have developed a number of analytical programs and databases that are increasingly important for advancing biological research. Because bioinformatics programs are used to analyze, visualize, and/or compare biological data, it is likely that the use of these programs will have a positive impact on biology education. Over the past years, we have been working to help biology instructors introduce bioinformatics activities into their curricula by providing them with instructional materials that use bioinformatics programs and databases as educational tools. In this study, we measured the impact of a set of these materials on student learning. The activities in these materials asked students to use the molecular structure visualization program Cn3D to locate, identify, or analyze diverse features in DNA structures. Both the experimental groups of college and high school students showed significant increases in learning relative to control groups. Further, learning gains by the college students were correlated with the number of activities assigned. We conclude that working with Cn3D was important for improving student understanding of DNA structure. This study is one example of how a bioinformatics program for visualization can be used to support student learning.
Related Concept Videos
The DNA Helix
The DNA Helix
Nucleic Acid Structure
DNA Structure
DNA has a double-helix structure. The...
Three-Dimensional Microscopy in Microbiology
X-ray Diffraction of Biological Samples
According to Bragg's law, when X-rays strike the sample positioned on a stage, the rays are scattered by the electron clouds around the sample atoms. The X-ray diffraction or scattering is caused by constructive interference of the X-ray waves that reflect off the internal crystal...
DNA as a Genetic Template

