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Updated: Jul 16, 2026

A Robust Discovery Platform for the Identification of Novel Mediators of Melanoma Metastasis
Published on: March 8, 2022
Silencing of tissue factor pathway inhibitor-2 gene in malignant melanomas
Yoshimasa Nobeyama1, Eriko Okochi-Takada, Junichi Furuta
1Carcinogenesis Division, National Cancer Center Research Institute, 5-1-1 Tsukiji, Chuo-ku, Tokyo, Japan.
Abstract:
To identify tumor-suppressor genes inactivated by aberrant methylation of promoter CpG islands (CGIs) in human malignant melanomas, genes upregulated by treatment of cells with a demethylating agent, 5-aza-2'-deoxycytidine (5-aza-dC), were searched for using oligonucleotide microarrays in melanoma cell lines, HMV-I, MeWo and WM-115. Seventy-nine known genes with CGIs were identified as being upregulated (>or=16-fold), and 18 of them had methylation of their putative promoter CGIs in 1 or more of 8 melanoma cell lines. Among the 18 genes, TFPI-2, which is involved in repression of the invasive potential of malignant melanomas, was further analyzed. Its expression was repressed in a melanoma cell line with its complete methylation, and was restored by 5-aza-dC treatment. It was unmethylated in cultured neonatal normal epidermal melanocyte, and was induced by ultraviolet B. In surgical melanoma specimens, TFPI-2 methylation was detected in 5 of 17 metastatic site specimens (29%), while it was not detected in 20 primary site specimens (0%) (p=0.009). By immunohistochemistry, the 5 specimens with promoter methylation lacked immunoreactivity for TFPI-2. The results showed that TFPI-2 is silenced in human malignant melanomas by methylation of its promoter CGI and suggested that its silencing is involved in melanoma metastasis.
Insights
Aberrant methylation silences the TFPI-2 tumor suppressor gene in melanoma, potentially driving metastasis. This gene silencing was reversed by demethylating agents and observed in metastatic melanoma tissues.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Aberrant promoter methylation of tumor suppressor genes is a key mechanism in cancer development.
- Identifying genes inactivated by methylation is crucial for understanding melanoma progression.
Purpose of the Study:
- To identify tumor suppressor genes inactivated by promoter CpG island (CGI) methylation in human malignant melanomas.
- To investigate the role of TFPI-2 gene silencing in melanoma metastasis.
Main Methods:
- Oligonucleotide microarrays were used to screen for genes upregulated by 5-aza-2'-deoxycytidine (5-aza-dC) in melanoma cell lines.
- Promoter CGI methylation status and gene expression were analyzed in melanoma cell lines and surgical specimens.
- TFPI-2 methylation and protein expression were assessed using methylation-specific PCR and immunohistochemistry.
Main Results:
- Seventy-nine genes were upregulated by 5-aza-dC, with 18 showing promoter CGI methylation in melanoma cell lines.
- TFPI-2, a repressor of melanoma invasion, was found to be methylated and silenced in melanoma cells, with expression restored by 5-aza-dC.
- TFPI-2 promoter methylation was detected in 29% of metastatic melanoma specimens but not in primary tumors, correlating with absent TFPI-2 immunoreactivity.
Conclusions:
- TFPI-2 is epigenetically silenced by promoter CGI methylation in human malignant melanomas.
- TFPI-2 silencing is associated with melanoma metastasis and may serve as a potential biomarker.
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