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Updated: Oct 9, 2026

Free Radicals in Chemical Biology: from Chemical Behavior to Biomarker Development
Published on: April 15, 2013
Partial purification of a human DNA glycosylase acting on the cyclic carcinogen adduct 1,N6-ethenodeoxyadenosine
B Rydberg1, Z H Qiu, M K Dosanjh
1Division of Cell and Molecular Biology, Donner Laboratory, Lawrence Berkeley Laboratory, University of California, Berkeley 94720.
Abstract:
We previously reported that a variety of human cells and tissues contained a Mr35,000 DNA-binding protein which selectively recognized a single 1,N6-ethenoadenine in a defined 25-base double-stranded oligonucleotide (B. Rydberg et al., Proc. Natl. Acad. Sci. USA, 88: 6839-6842, 1991). We now demonstrate that incubation of the same duplex with 50-fold partially purified binding protein from human placenta results in release of the free 1,N6-ethenoadenine base, indicative of DNA glycosylase action. This enzyme activity appears unique in that it excises a cyclic adduct resulting from a known human carcinogen.
Insights
Researchers identified a human DNA glycosylase enzyme that removes 1,N6-ethenoadenine, a DNA adduct formed by a known human carcinogen. This enzyme activity is crucial for DNA repair and preventing mutations.
Area of Science:
- Molecular Biology
- Biochemistry
- DNA Repair Mechanisms
Background:
- A previously identified Mr35,000 DNA-binding protein selectively recognizes 1,N6-ethenoadenine in double-stranded DNA.
- 1,N6-ethenoadenine is a cyclic DNA adduct formed by exposure to certain carcinogens.
Purpose of the Study:
- To investigate the enzymatic activity of the DNA-binding protein that recognizes 1,N6-ethenoadenine.
- To determine if this protein possesses DNA glycosylase activity for removing the adduct.
Main Methods:
- Incubation of a defined 25-base double-stranded oligonucleotide containing 1,N6-ethenoadenine with partially purified binding protein from human placenta.
- Analysis of the reaction products to detect the release of free 1,N6-ethenoadenine base.
Main Results:
- The partially purified binding protein from human placenta released free 1,N6-ethenoadenine base upon incubation with the modified oligonucleotide.
- This release is indicative of DNA glycosylase activity, specifically excising the cyclic adduct.
Conclusions:
- The human DNA-binding protein exhibits DNA glycosylase activity, uniquely excising the 1,N6-ethenoadenine adduct.
- This enzyme plays a role in the repair of DNA damage caused by human carcinogens.
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