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High-throughput Assay to Phenotype Salmonella enterica Typhimurium Association, Invasion, and Replication in Macrophages
Published on: August 11, 2014
Multidrug-resistant Salmonella enterica serovar paratyphi A harbors IncHI1 plasmids similar to those found in serovar
Kathryn E Holt1, Nicholas R Thomson, John Wain
1Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.
Abstract:
Salmonella enterica serovars Typhi and Paratyphi A cause systemic infections in humans which are referred to as enteric fever. Multidrug-resistant (MDR) serovar Typhi isolates emerged in the 1980s, and in recent years MDR serovar Paratyphi A infections have become established as a significant problem across Asia. MDR in serovar Typhi is almost invariably associated with IncHI1 plasmids, but the genetic basis of MDR in serovar Paratyphi A has remained predominantly undefined. The DNA sequence of an IncHI1 plasmid, pAKU_1, encoding MDR in a serovar Paratyphi A strain has been determined. Significantly, this plasmid shares a common IncHI1-associated DNA backbone with the serovar Typhi plasmid pHCM1 and an S. enterica serovar Typhimurium plasmid pR27. Plasmids pAKU_1 and pHCM1 share 14 antibiotic resistance genes encoded within similar mobile elements, which appear to form a 24-kb composite transposon that has transferred as a single unit into different positions into their IncHI1 backbones. Thus, these plasmids have acquired similar antibiotic resistance genes independently via the horizontal transfer of mobile DNA elements. Furthermore, two IncHI1 plasmids from a Vietnamese isolate of serovar Typhi were found to contain features of the backbone sequence of pAKU_1 rather than pHCM1, with the composite transposon inserted in the same location as in the pAKU_1 sequence. Our data show that these serovar Typhi and Paratyphi A IncHI1 plasmids share highly conserved core DNA and have acquired similar mobile elements encoding antibiotic resistance genes in past decades.
Insights
Multidrug-resistant Salmonella Typhi and Paratyphi A infections are a growing concern. This study reveals that their resistance-conferring IncHI1 plasmids share a common DNA backbone and independently acquired similar antibiotic resistance genes.
Area of Science:
- Microbiology
- Genetics
- Infectious Diseases
Background:
- Salmonella enterica serovars Typhi and Paratyphi A cause enteric fever, a significant human systemic infection.
- Multidrug resistance (MDR) in Salmonella Typhi is linked to IncHI1 plasmids, but the genetic basis for MDR in Salmonella Paratyphi A was largely unknown.
- MDR Salmonella Paratyphi A infections are a growing public health problem, particularly in Asia.
Purpose of the Study:
- To determine the genetic basis of multidrug resistance in Salmonella Paratyphi A by sequencing an IncHI1 plasmid.
- To compare the genetic elements of Salmonella Paratyphi A IncHI1 plasmids with those found in Salmonella Typhi and Salmonella Typhimurium.
Main Methods:
- DNA sequencing of the IncHI1 plasmid pAKU_1 from a multidrug-resistant Salmonella Paratyphi A strain.
- Comparative genomic analysis of pAKU_1 with other IncHI1 plasmids, including pHCM1 (Salmonella Typhi) and pR27 (Salmonella Typhimurium).
- Analysis of mobile genetic elements and antibiotic resistance genes within the plasmids.
Main Results:
- The IncHI1 plasmid pAKU_1 confers multidrug resistance in Salmonella Paratyphi A.
- pAKU_1 shares a conserved IncHI1 DNA backbone with Salmonella Typhi plasmid pHCM1 and Salmonella Typhimurium plasmid pR27.
- Both pAKU_1 and pHCM1 contain 14 similar antibiotic resistance genes within a shared 24-kb composite transposon, acquired independently via horizontal gene transfer.
- Two IncHI1 plasmids from Vietnamese Salmonella Typhi isolates showed backbone features similar to pAKU_1, with the composite transposon in the same location.
Conclusions:
- Salmonella Typhi and Paratyphi A IncHI1 plasmids share a highly conserved core DNA.
- Similar antibiotic resistance genes have been acquired independently by these plasmids through the horizontal transfer of mobile DNA elements.
- This suggests convergent evolution in the acquisition of multidrug resistance in these important human pathogens.
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