Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Experiment Videos

Cell tracking using a photoconvertible fluorescent protein.

Kohei Hatta1, Hitomi Tsujii, Tomomi Omura

  • 1Laboratory for Vertebrate Body Plan, Center for Developmental Biology, RIKEN Kobe 2-2-3 Minatojima Minamimachi, Chuo-ku, Kobe 650-0047, Japan. khatta@cdb.riken.jp

Nature Protocols
|April 5, 2007
PubMed
Summary
This summary is machine-generated.

Related Concept Videos

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Early Diffusion and Regional Variation in Robot-Assisted Laparoscopic Resection for Malignant Colon Tumors in Japan: An Analysis of National Database Open Data From Fiscal Years 2022 and 2023.

Asian journal of endoscopic surgery·2026
Same author

A Case of Bullous Pemphigoid Triggered by COVID-19 Infection in a Patient Receiving a Dipeptidyl Peptidase-4 Inhibitor.

Cureus·2025
Same author

Intestinal expression patterns of transcription factors and markers for interstitial cells in the larval zebrafish.

Development, growth & differentiation·2023
Same author

Ca<sup>2+</sup>-imaging and photo-manipulation of the simple gut of zebrafish larvae in vivo.

Scientific reports·2022
Same author

The enteric nervous system in zebrafish larvae can regenerate via migration into the ablated area and proliferation of neural crest-derived cells.

Development (Cambridge, England)·2020
Same author

Local heat-shock mediated multi-color labeling visualizing behaviors of enteric neural crest cells associated with division and neurogenesis in zebrafish gut.

Developmental dynamics : an official publication of the American Association of Anatomists·2019
Same journal

iMUT-seq mapping of DSB-induced mutations with high sensitivity at single-nucleotide resolution.

Nature protocols·2026
Same journal

An assay to quantify sexual commitment and stage conversion in the human malaria parasite Plasmodium falciparum.

Nature protocols·2026
Same journal

Author Correction: Direct inoculation of bioreactor-controlled stirred suspension culture with cryopreserved human pluripotent stem cells.

Nature protocols·2026
Same journal

High-throughput measurements of protein domain functions using magnetic separation.

Nature protocols·2026
Same journal

Inducing physiological polarity and performing gene editing using CRISPR-Cas9 in human trophoblast organoids.

Nature protocols·2026
Same journal

Photocatalytic low-temperature defluorination of PTFE.

Nature protocols·2026
See all related articles

Researchers developed a new method using the Kaede protein and confocal microscopy to track cell development in zebrafish. This technique visualizes cell movement and neuronal shape, aiding the study of multicellular organism development.

Area of Science:

  • Developmental Biology
  • Cell Biology
  • Microscopy

Background:

  • Tracking cell fate, shape, and migration is crucial for understanding multicellular organism development.
  • Existing methods may have limitations in visualizing dynamic cellular processes.
  • Photoconvertible fluorescent proteins offer novel ways to label and track cells.

Purpose of the Study:

  • To present a protocol for tracking cell fate, shape, and migration using the photoconvertible protein Kaede.
  • To demonstrate the application of this technique in zebrafish embryos for visualizing developmental processes.
  • To adapt the protocol for other fluorescent molecules and advanced microscopy techniques.

Main Methods:

  • Utilizing the Kaede protein, which shifts from green to red fluorescence upon photoconversion with violet or UV light.

Related Experiment Videos

  • Employing confocal laser scanning microscopy to track labeled cells in zebrafish embryos.
  • Implementing mRNA injection, DNA injection for mosaic expression, and the UAS-Gal4 system for transgenic fish creation.
  • Main Results:

    • Successfully visualized cell movements and traced neuronal shapes in developing zebrafish.
    • Demonstrated the visualization of morphogenetic processes including neurulation, placode formation, and axon navigation.
    • Showcased the adaptability of the protocol for other fluorescent proteins (KikGR, Dronpa) and two-photon microscopy for deeper tissue imaging.

    Conclusions:

    • The Kaede-based photoconversion technique provides a powerful tool for studying cell dynamics during development.
    • This protocol enables detailed visualization of cellular processes in vivo.
    • The method is versatile and can be applied to various developmental contexts and advanced imaging setups.