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Published on: August 12, 2015
A mechanism for transcriptional repression dependent on the BRCA1 E3 ubiquitin ligase
Andrew A Horwitz1, El Bachir Affar, George F Heine
1Department of Pathology, Harvard Medical School and Brigham and Women's Hospital, Boston, MA 02115, USA.
Abstract:
Loss of function of the tumor suppressor protein BRCA1 is responsible for a high percentage of familial and also sporadic breast cancers. Early work identified a stimulatory transcriptional coactivator function for the BRCA1 protein, and more recently, BRCA1 has been implicated in transcriptional repression, although few examples of repressed genes have been characterized. We recently used an in vitro transcription assay to identify a biochemical mechanism that explained the BRCA1 stimulatory activity. In this study, we identified an ubiquitin-dependent mechanism by which BRCA1 inhibits transcription. BRCA1 ubiquitinates the transcriptional preinitiation complex, preventing stable association of TFIIE and TFIIH, and thus blocks the initiation of mRNA synthesis. What is striking about this mechanism of regulation by BRCA1 is that the ubiquitination of the preinitiation complex is not targeting proteins for degradation by the proteasome, nor are ubiquitin receptors modifying the activity, but rather the ubiquitin moiety itself interferes with the assembly of basal transcription factors at the promoter. Using RNAi to knockdown expression of the endogenous BRCA1 protein, we assessed the level of repression dependent on BRCA1 in the cell, and we found that BRCA1 is at least as significant a transcriptional repressor as it is an activator. These results define a biochemical mechanism by which the BRCA1 enzymatic activity regulates a key cellular process.
Insights
The tumor suppressor BRCA1 protein inhibits gene transcription by ubiquitinating key factors, preventing their assembly. This ubiquitin-dependent mechanism reveals BRCA1
Area of Science:
- Molecular Biology
- Cancer Research
- Biochemistry
Background:
- Loss of function in the BRCA1 tumor suppressor protein is a key factor in many breast cancers.
- BRCA1 was previously known to stimulate transcription, but its role in transcriptional repression was less understood.
- Few repressed genes and the mechanisms behind BRCA1-mediated repression were not well characterized.
Purpose of the Study:
- To elucidate the biochemical mechanism by which BRCA1 inhibits gene transcription.
- To investigate the role of ubiquitination in BRCA1-mediated transcriptional repression.
- To determine the significance of BRCA1 as a transcriptional repressor in cellular contexts.
Main Methods:
- In vitro transcription assays were used to identify the mechanism of BRCA1's inhibitory activity.
- BRCA1's ubiquitination of the transcriptional preinitiation complex was analyzed.
- RNA interference (RNAi) was employed to knock down endogenous BRCA1 expression and assess repression levels.
Main Results:
- BRCA1 inhibits transcription through an ubiquitin-dependent mechanism.
- BRCA1 ubiquitinates the transcriptional preinitiation complex, hindering the stable association of TFIIE and TFIIH.
- The ubiquitin moiety directly interferes with basal transcription factor assembly, rather than targeting proteins for degradation.
- BRCA1 functions as a significant transcriptional repressor, comparable to its known activator role.
Conclusions:
- BRCA1 utilizes an enzymatic activity to ubiquitinate the transcriptional preinitiation complex, thereby repressing transcription.
- This mechanism involves the ubiquitin moiety directly impeding transcription factor assembly, not protein degradation.
- BRCA1 plays a dual role in gene regulation, acting as both a transcriptional activator and repressor.
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