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Processing the Loblolly Pine PtGen2 cDNA Microarray
Published on: March 20, 2009
cDNA cloning and expression analysis of a mannose-binding lectin from Pinellia pedatisecta
Juan Lin1, Xuanwei Zhou, Shi Gao
1State Key Laboratory of Genetic Engineering, Fudan-SJTU-Nottingham Plant Biotechnology R and D Center, School of Life Sciences, Morgan-Tan International Center for Life Sciences, Fudan University, Shanghai 200433, People's Republic of China.
Journal of Biosciences
|April 17, 2007
Summary
Pinellia pedatisecta agglutinin (PPA) is a basic protein cloned from P. pedatisecta. Its gene is a multi-copy gene family, expressed in various tissues, showing potential for pest and disease control in plants.
Area of Science:
- Plant biochemistry
- Molecular biology
- Genetics
Background:
- Pinellia pedatisecta agglutinin (PPA) is a basic protein found in P. pedatisecta tubers.
- PPA is a 40 kDa hetero-tetramer protein composed of two polypeptide chains A and two polypeptide chains B.
Purpose of the Study:
- To clone the full-length cDNA of PPA from P. pedatisecta.
- To analyze the PPA precursor's structure, including mannose-binding sites and conserved domains.
- To investigate the PPA gene's family size, expression patterns, and potential applications.
Main Methods:
- SMART RACE-PCR technology was used to clone the full-length PPA cDNA.
- Southern blot analysis was performed to determine the gene copy number.
- Expression pattern analysis was conducted across various P. pedatisecta tissues.
Main Results:
- The cloned PPA cDNA was 1146 bp, containing a 771 bp ORF encoding a 256-amino acid lectin precursor with a signal peptide.
- The precursor contained three mannose-binding sites and two conserved domains (PPA-DOM 1 and PPA-DOM 2).
- Southern blot indicated PPA is a multi-copy gene family, with high expression in spadix, spathe, and tuber.
Conclusions:
- Cloning the PPA gene provides a foundation for studying its structure, expression, and regulation.
- The PPA gene holds potential for future applications in pest and fungal disease control through gene transfer into plants.

