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Updated: Jul 15, 2026

Development and Application of Rapamycin-regulated Tyrosine Phosphatases
Published on: September 6, 2024
The Rheb switch 2 segment is critical for signaling to target of rapamycin complex 1
Xiaomeng Long1, Yenshou Lin1, Sara Ortiz-Vega1
1Diabetes Unit and Medical Services and the Department of Molecular Biology, Massachusetts General Hospital, and the Department of Medicine, Harvard Medical School, Boston, Massachusetts 02114.
Abstract:
The small GTPase Rheb is a positive upstream regulator of the target of rapamycin (TOR) complex 1 in mammalian cells and can bind directly to TOR complex 1. To identify the regions of the Rheb surface most critical for signaling to TOR complex 1, we created a set of 26 mutants wherein clusters of 1-5 putative solvent-exposed residues were changed to alanine, ultimately changing 65 residues distributed over the entire Rheb surface. The signaling function of these mutants was assessed by their ability, in comparison to wild type Rheb, to restore the phosphorylation of S6K1(Thr389) when expressed transiently in amino acid-deprived 293T cells. The major finding is that two mutants situated in the Rheb switch 2 segment, Y67A/I69A and I76A/D77A, exhibit a near total loss of function, whereas extensive replacement of the switch 1 segment and other surface residues with alanines causes relatively little disturbance of Rheb rescue of S6K1 from amino acid withdrawal. This is surprising in view of the minimal impact of guanyl nucleotide on Rheb switch 2 configuration. The loss of function Rheb switch 2 mutants are well expressed and exhibit partial agonist function in amino acid-replete cells. They are unimpaired in their ability to bind GTP or mammalian (m)TOR in vivo or in vitro, and the mTOR polypeptides retrieved with these inactive Rheb mutants exhibit kinase activity in vitro comparable with mTOR bound to wild type Rheb. We conclude that Rheb signaling to mTOR in vivo requires a Rheb switch 2-dependent interaction with an element other than the three known polypeptide components of TOR complex 1.
Insights
Rheb signaling to the target of rapamycin (TOR) complex 1 involves its switch 2 region. Specific Rheb mutants in switch 2 lose function, indicating interaction with unknown TOR complex 1 components.
Area of Science:
- Molecular Biology
- Cell Signaling
- Biochemistry
Background:
- The small GTPase Rheb is a key regulator of the mechanistic target of rapamycin (mTOR) complex 1.
- Rheb directly binds to mTOR complex 1, influencing its signaling activity.
- Understanding Rheb's interaction with mTOR is crucial for deciphering cellular growth and metabolism pathways.
Purpose of the Study:
- To identify critical regions on the Rheb protein surface involved in signaling to mTOR complex 1.
- To investigate the functional significance of specific Rheb residues in regulating mTORC1 activity.
Main Methods:
- Systematic mutagenesis of Rheb by creating 26 alanine substitution mutants, altering 65 residues.
- Assessing mutant Rheb signaling function by measuring S6K1 phosphorylation in amino acid-deprived cells.
- Evaluating mutant Rheb expression, GTP binding, and interaction with mTOR in vitro and in vivo.
Main Results:
- Two Rheb mutants in the switch 2 region (Y67A/I69A and I76A/D77A) showed a near-complete loss of signaling function.
- Mutations in the Rheb switch 1 segment and other surface residues had minimal impact on Rheb's ability to rescue S6K1 phosphorylation.
- Loss-of-function Rheb switch 2 mutants maintained GTP binding and mTOR interaction, with associated mTOR kinase activity.
Conclusions:
- Rheb signaling to mTOR complex 1 in vivo necessitates a Rheb switch 2-dependent interaction.
- This interaction involves an element distinct from the known three polypeptide components of TOR complex 1.
- The Rheb switch 2 region plays a critical, non-canonical role in mediating Rheb-mTOR signaling.
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