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Related Concept Videos

Telomeres and Telomerase02:41

Telomeres and Telomerase

In eukaryotic DNA replication, a single-stranded DNA fragment remains at the end of a chromosome after the removal of the final primer. This section of DNA cannot be replicated in the same manner as the rest of the strand because there is no 3’ end to which the newly synthesized DNA can attach. This non-replicated fragment results in gradual loss of the chromosomal DNA during each cell duplication. Additionally, it can induce a DNA damage response by enzymes that recognize single-stranded DNA.
Single-Strand DNA Binding Proteins01:03

Single-Strand DNA Binding Proteins

For successful DNA replication, the unwinding of double-stranded DNA must be accompanied by stabilization and protection of the separated single strands of the DNA. This crucial task is performed by single-strand DNA-binding (SSB) proteins. They bind to the DNA in a sequence-independent manner, which means that the nitrogenous bases of the DNA need not be present in a specific order for binding of SSB proteins to it. The binding of SSB proteins straightens single-stranded DNA (ssDNA) and makes...
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Homologous Recombination

The basic reaction of homologous recombination (HR) involves two chromatids that contain DNA sequences sharing a significant stretch of identity. One of these sequences uses a strand from another as a template to synthesize DNA in an enzyme-catalyzed reaction. The final product is a novel amalgamation of the two substrates. To ensure an accurate recombination of sequences, HR is restricted to the S and G2 phases of the cell cycle. At these stages, the DNA has been replicated already and the...
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Restarting Stalled Replication Forks

DNA replication is initiated at sites containing predefined DNA sequences known as origins of replication. DNA is unwound at these sites by the minichromosome maintenance (MCM) helicase and other factors such as Cdc45 and the associated GINS complex.The unwound single strands are protected by replication protein A (RPA) until DNA polymerase starts synthesizing DNA at the 5’ end of the strand in the same direction as the replication fork. To prevent the replication fork from falling apart, a...
Fixing Double-strand Breaks02:04

Fixing Double-strand Breaks

The double-stranded structure of DNA has two major advantages. First, it serves as a safe repository of genetic information where one strand serves as the back-up in case the other strand is damaged. Second, the double-helical structure can be wrapped around proteins called histones to form nucleosomes, which can then be tightly wound to form chromosomes. This way, DNA chains up to 2 inches long can be contained within microscopic structures in a cell. A double-stranded break not only damages...
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Chromosome Replication

Before a cell can divide, it must accurately replicate all of its chromosomes, including the DNA and its associated histone and non-histone proteins.  This process begins at numerous origins of replication during the S phase of the cell cycle in each of a cell’s chromosomes simultaneously. Certain nucleotides can act as origins of replication, but these sequences are not well defined - especially in complex, multi-cellular, eukaryotic species. The length of DNA that spans an origin of...

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Single-Molecule Fluorescence Visualization of DNA Polymerase Dynamics at G-Quadruplexes
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Induction of parallel human telomeric G-quadruplex structures by Sr(2+).

Ilene M Pedroso1, Luis F Duarte, Giscard Yanez

  • 1Department of Biochemistry and Molecular Biology, University of Miami, School of Medicine, P.O. Box 016129 (R629), Miami, FL 33101-6129, USA.

Biochemical and Biophysical Research Communications
|May 9, 2007
PubMed
Summary

Strontium ions (Sr2+) induce human telomeric DNA to form G-quadruplex structures. These parallel-stranded structures, both inter- and intramolecular, offer models for telomerase research and potential anti-cancer drug development.

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Area of Science:

  • Biochemistry
  • Structural Biology
  • Molecular Biology

Background:

  • Human telomeric DNA forms G-quadruplex structures.
  • These structures inhibit telomerase and are anti-cancer drug targets.

Purpose of the Study:

  • Investigate Sr(2+) induction of human telomeric DNA G-quadruplexes.
  • Characterize the structural properties and cation-specific effects.

Main Methods:

  • Oligonucleotide synthesis with varying repeats.
  • Circular dichroism spectroscopy.
  • Analysis of inter- and intramolecular structures.

Main Results:

  • Sr(2+) induces both inter- and intramolecular G-quadruplexes.
  • Sr(2+) favors intermolecular structures with 2-5 repeats.
  • Parallel-stranded structures observed, distinct from Na(+) or K(+).

Conclusions:

  • Sr(2+) promotes unique parallel-stranded G-quadruplexes.
  • These structures serve as models for telomerase substrate recognition.
  • Potential implications for anti-cancer drug design targeting telomeres.