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Published on: July 25, 2020
Highly aggressive behavior of malignant rhabdoid tumor: a special reference to SMARCB1/INI1 gene alterations using
Kenichi Kohashi1, Yoshinao Oda, Hidetaka Yamamoto
1Department of Anatomic Pathology, Pathological Sciences, Graduate School of Medical Sciences, Kyushu University, Maidashi 3-1-1, Higashi-ku, Fukuoka, 812-8582, Japan.
Purpose:
SMARCB1/INI1, which negatively regulates cell cycle progression from G0/G1 into the S-phase via the p16INK4a-RB-E2F pathway, has been reported to be inactivated homozygously by deletion and/or mutations in malignant rhabdoid tumor (MRT). In the current study, we investigated the alteration of the SMARCB1/INI1 gene using simple methods, and its gene product at the protein level. Moreover, we investigated the status of hyperphosphorylation in RB protein, known as a key cell cycle molecule.
Methods:
Three cell lines and 11 formalin-fixed, paraffin-embedded specimens of MRT were investigated. SMARCB1/INI1 gene alteration was analyzed with simple methods as a quantitative real-time PCR and direct sequencing method. Furthermore, SMARCB1/INI1 and RB protein were immunohistochemically evaluated.
Results:
In 12 of 14 cases, we detected genetic alterations comprised of nine (including three cell lines) homozygous deletions and three mutations, which can induce abnormal expression of gene products. At the protein level, SMARCB1/INI1 immunohistochemical expressions were not detected in any cases. Twelve out of 14 cases showed high-level (+5) expression of tRB (both hyperphosphorylated and underphosphorylated RB), combined with low-level (+1) expression of uRB (underphosphorylated RB), indicating a high rate of hyperphosphorylation.
Conclusions:
We could analyze the SMARCB1/INI1 gene alteration with simple methods, and SMARCB1/INI1 gene alteration was found in 12 of 14 cases. Especially, quantitative real-time PCR was a convenient and accurate method. In addition, a high rate of hyperphosphorylation of RB gene was recognized. These results suggest that the clinically aggressive character of MRT is caused by the inactivation of the SMARCB1/INI1 gene.
Insights
SMARCB1/INI1 gene alterations, including deletions and mutations, were found in 12 of 14 malignant rhabdoid tumor cases. This inactivation correlates with high RB protein hyperphosphorylation and the aggressive nature of MRT.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Malignant rhabdoid tumor (MRT) is characterized by homozygous inactivation of the SMARCB1/INI1 gene.
- SMARCB1/INI1 normally regulates cell cycle progression via the p16INK4a-RB-E2F pathway.
- Understanding SMARCB1/INI1 alterations is crucial for comprehending MRT pathogenesis.
Purpose of the Study:
- To investigate SMARCB1/INI1 gene alterations using simple methods.
- To analyze SMARCB1/INI1 protein expression.
- To evaluate the phosphorylation status of the RB protein in MRT.
Main Methods:
- Analysis of SMARCB1/INI1 gene alterations via quantitative real-time PCR and direct sequencing.
- Immunohistochemical evaluation of SMARCB1/INI1 and RB protein expression.
- Assessment of RB protein hyperphosphorylation in MRT cell lines and specimens.
Main Results:
- Genetic alterations in SMARCB1/INI1 (deletions or mutations) were detected in 12 out of 14 MRT cases.
- No SMARCB1/INI1 protein expression was observed in any of the investigated MRT cases.
- A high rate of RB protein hyperphosphorylation was evident in 12 of 14 cases.
Conclusions:
- Simple methods, particularly quantitative real-time PCR, are effective for analyzing SMARCB1/INI1 gene alterations.
- SMARCB1/INI1 gene inactivation is a frequent event in MRT.
- The observed SMARCB1/INI1 inactivation and RB hyperphosphorylation likely contribute to the aggressive clinical behavior of MRT.
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