Related Experiment Video
Updated: Jul 15, 2026

Detection of Human Leukocyte Antigen Biomarkers in Breast Cancer Utilizing Label-free Biosensor Technology
Published on: March 24, 2015
Identification of arsenic-binding proteins in human breast cancer cells
Xinyan Zhang1, Fan Yang, Joong-Youn Shim
1Cancer Research Program, Julius L Chambers Biomedical/Biotechnology Research Institute, North Carolina Central University, Durham, NC 27707, USA.
Abstract:
As a cancer chemotherapeutic drug, arsenic acts on numerous intracellular signal transduction pathways in cancer cells. However, its mechanism of actions is still not fully understood. Previous studies suggest that arsenic reacts with closely spaced cysteine (Cys) residues of proteins with high Cys content and accessible sulfhydryl (SH) groups. In this study, human breast cancer cell line MCF-7 was examined as a cellular model to explore arsenic-binding proteins and the mechanism of binding. An arsenic-biotin conjugate was synthesized by coupling the pentafluorophenol ester of biotin with p-aminophenylarsenoxide. Arsenic-binding proteins were eluted with streptavidin resin from arsenic-biotin treated MCF-7 cells, separated by polyacrylamide gel electrophoresis, and identified by matrix assisted laser desorption ionization mass spectrometry (MALDI-MS). Arsenic-binding properties of two of these proteins, beta-tubulin and pyruvate kinase M2 (PKM2), were studied further in vitro and the biological consequences of this binding was evaluated. Binding assay with Western blotting confirmed binding of beta-tubulin and PKM2 by arsenic in a concentration-dependent manner. Arsenic binding inhibited tubulin polymerization, but surprisingly had no effect on PKM2 activity. Molecular modeling showed that binding of Cys(12) alone or vicinal Cys residues (Cys(12) and Cys(213)) of beta-tubulin by arsenic blocked the active site for access of GTP, which is necessary for tubulin polymerization. On the contrary, all Cys residues of PKM2 were far away from the active site of the enzyme. In summary, this study confirmed beta-tubulin and PKM2 as arsenic-binding proteins in MCF-7 cells. Functional consequence of such binding may depend on whether arsenic binding causes conformational changes or blocks active sites of target proteins.
Insights
Arsenic binds to beta-tubulin and pyruvate kinase M2 (PKM2) in breast cancer cells. Arsenic inhibits beta-tubulin polymerization by blocking GTP access, but does not affect PKM2 activity.
Area of Science:
- Oncology
- Biochemistry
- Molecular Biology
Background:
- Arsenic is a cancer chemotherapeutic agent with incompletely understood mechanisms.
- Arsenic is known to interact with cysteine residues in proteins.
- The human breast cancer cell line MCF-7 serves as a model to study arsenic interactions.
Purpose of the Study:
- To identify proteins that bind arsenic in MCF-7 cells.
- To investigate the binding mechanism of arsenic to identified proteins.
- To evaluate the biological consequences of arsenic binding to beta-tubulin and pyruvate kinase M2 (PKM2).
Main Methods:
- Synthesis of an arsenic-biotin conjugate.
- Affinity purification of arsenic-binding proteins using streptavidin resin.
- Protein identification via matrix-assisted laser desorption ionization mass spectrometry (MALDI-MS).
- In vitro binding assays (Western blotting) and molecular modeling.
Main Results:
- Beta-tubulin and PKM2 were identified as arsenic-binding proteins in MCF-7 cells.
- Arsenic binding to beta-tubulin was confirmed and inhibited tubulin polymerization.
- Arsenic binding to PKM2 did not affect its enzymatic activity.
- Molecular modeling indicated arsenic blocks GTP access to beta-tubulin's active site, but not for PKM2.
Conclusions:
- Beta-tubulin and PKM2 are confirmed arsenic-binding proteins in breast cancer cells.
- Arsenic's inhibition of tubulin polymerization is likely due to active site blockage.
- The functional impact of arsenic binding depends on the specific protein and its active site accessibility.

