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Updated: Jul 14, 2026

A High-Throughput Enzyme-Coupled Activity Assay to Probe Small Molecule Interaction with the dNTPase SAMHD1
Published on: April 16, 2021
Conserved roles of Sam50 and metaxins in VDAC biogenesis
Vera Kozjak-Pavlovic1, Katharina Ross, Nouhad Benlasfer
1Department of Molecular Biology, Max-Planck-Institut für Infektionsbiologie, Charitéplatz 1, D-10117, Berlin, Germany.
Abstract:
Voltage-dependent anion-selective channel (VDAC) is a beta-barrel protein in the outer mitochondrial membrane that is necessary for metabolite exchange with the cytosol and is proposed to be involved in certain forms of apoptosis. We studied the biogenesis of VDAC in human mitochondria by depleting the components of the mitochondrial import machinery by using RNA interference. Here, we show the importance of the translocase of the outer mitochondrial membrane (TOM) complex in the import of the VDAC precursor. The deletion of Sam50, the central component of the sorting and assembly machinery (SAM), led to both a strong defect in the assembly of VDAC and a reduction in the steady-state level of VDAC. Metaxin 2-depleted mitochondria had reduced levels of metaxin 1 and were deficient in import and assembly of VDAC and Tom40, but not of three matrix-targeted precursors. We also observed a reduction in the levels of metaxin 1 and metaxin 2 in Sam50-depleted mitochondria, implying a connection between these three proteins, although Sam50 and metaxins seemed to be in different complexes. We conclude that the pathway of VDAC biogenesis in human mitochondria involves the TOM complex, Sam50 and metaxins, and that it is evolutionarily conserved.
Insights
The study reveals that the translocase of the outer mitochondrial membrane (TOM) complex, Sam50, and metaxins are crucial for voltage-dependent anion-selective channel (VDAC) biogenesis in human mitochondria. This pathway is essential for VDAC assembly and function.
Area of Science:
- Mitochondrial biology
- Protein import and assembly
- Cellular metabolism
Background:
- Voltage-dependent anion-selective channel (VDAC) is a key protein in the outer mitochondrial membrane, regulating metabolite transport and implicated in apoptosis.
- Understanding VDAC biogenesis is crucial for comprehending mitochondrial function and cellular processes.
Purpose of the Study:
- To investigate the molecular machinery involved in the biogenesis of human VDAC.
- To elucidate the roles of the translocase of the outer mitochondrial membrane (TOM) complex, sorting and assembly machinery (SAM) components, and metaxins in VDAC import and assembly.
Main Methods:
- Utilized RNA interference to deplete specific components of the mitochondrial import machinery.
- Analyzed the impact of protein depletion on VDAC precursor import, assembly, and steady-state levels.
- Investigated the interplay between TOM complex, SAM complex (specifically Sam50), and metaxins in VDAC biogenesis.
Main Results:
- Demonstrated the essential role of the TOM complex in VDAC precursor import.
- Showed that depletion of Sam50, a core SAM component, severely impairs VDAC assembly and reduces its steady-state levels.
- Identified that metaxin depletion affects VDAC and Tom40 import and assembly, suggesting a coordinated pathway involving TOM, Sam50, and metaxins.
Conclusions:
- The biogenesis pathway for VDAC in human mitochondria involves the concerted action of the TOM complex, Sam50, and metaxins.
- This pathway for VDAC assembly is conserved across evolution.
- Disruptions in these components lead to significant defects in VDAC homeostasis and mitochondrial function.
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