Related Experiment Video
Updated: Jul 14, 2026

Mapping Alzheimer's Disease Variants to Their Target Genes Using Computational Analysis of Chromatin Configuration
Published on: January 9, 2020
Association of integrin alpha2 gene variants with ischemic stroke
Mar Matarin1, W Mark Brown, John A Hardy
1Neurogenetics Laboratory, National Institute on Aging, Bethesda, Maryland, USA.
Genetic variations in the integrin alpha2 (ITGA2) gene are linked to increased ischemic stroke risk. This study found specific ITGA2 single-nucleotide polymorphisms (tSNPs) associated with higher stroke risk in North American populations.
Area of Science:
- Genetics
- Neurology
- Cardiovascular Research
Background:
- Genetic variants in the integrin alpha2 (ITGA2) gene have been previously associated with an elevated risk of ischemic stroke.
- Integrin alpha2 plays a crucial role in platelet aggregation and vascular cell adhesion, suggesting a potential mechanism in stroke pathogenesis.
Purpose of the Study:
- To investigate the association between haplotype-tagging single-nucleotide polymorphisms (tSNPs) in the ITGA2 gene and the risk of ischemic stroke.
- To analyze these associations in a North American cohort of stroke cases and controls.
Main Methods:
- Genotyping of thirteen haplotype-tagging single-nucleotide polymorphisms (tSNPs) in the ITGA2 gene.
- Association tests were performed for individual tSNPs and across all tSNPs, including haplotype association analysis.
- Secondary analyses examined stroke subtypes using Trial of Org 10172 in Acute Stroke Treatment (TOAST) criteria.
Main Results:
- A significant association was observed between tSNP rs3756541 (OR, 1.49; P=0.009) and ischemic stroke risk.
- A trend toward association was noted for tSNP rs2303124 (OR, 1.56; P=0.03).
- These associations remained significant in haplotype analyses and did not differentiate stroke etiology based on TOAST criteria.
Conclusions:
- Genetic variability within the ITGA2 gene is suggested to confer risk for ischemic stroke, potentially independent of conventional risk factors.
- These findings support the role of platelet receptor genes, such as ITGA2, in the pathogenesis of various ischemic stroke subtypes.
Related Concept Videos
Intracellular Signaling Affects Focal Adhesions
Some...
Ischemic Stroke ll: Pathophysiology
Ischemic Stroke l: Introduction
Pharmacogenetic Phenotypes: Alterations in Pharmacokinetics, Drug Targets and Biologic Milieu
Hemorrhagic Stroke ll: Pathophysiology
Genome-wide Association Studies-GWAS
GWAS does not require the identification of the target gene involved in...