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Somatic mutations of BECN1, an autophagy-related gene, in human cancers
Jong Woo Lee1, Eun Goo Jeong, Sung Hak Lee
1Department of Pathology, College of Medicine, The Catholic University of Korea, Seoul, Korea.
Abstract:
Evasion of programmed cell death (PCD) is one of the hallmarks of human cancers. It is well known that not only apoptosis, but also autophagy, acts as an action mechanism of PCD. BECN1 protein is a key regulator of autophagic PCD. The BECN1 gene that encodes BECN1 protein acts as a haploinsufficient tumor-suppressor gene. However, to date, data on BECN1 mutation in human cancer tissues are lacking. To explore the possibility that somatic mutation of the BECN1 gene might contribute to the development of human cancers, we analyzed the entire coding region and all splice sites of the human BECN1 gene for detection of somatic mutations in 180 gastric carcinomas, 94 breast carcinomas, 50 acute leukemias, 50 colorectal carcinomas, 50 hepatocellular carcinomas, and 124 non-small cell lung cancers by single-strand conformation polymorphism (SSCP) and DNA sequencing. Overall, we detected 11 somatic mutations of the BECN1 gene, including 3 missense mutations (N8K, P350R and R389C) in coding sequences and 8 mutations in introns. The mutations were observed in five gastric, three colorectal, one lung and one breast carcinoma (s). We expressed the three mutations (N8K, P350R and R389C) in HT1080 cells, and found that two (P350R and R389C) of them showed only slightly decreased cell death activities compared to the wild-type BECN1. This is the first report on BECN1 gene mutations in human cancer tissues, and the data suggest that point mutations are a rare event in common human cancers and probably do not play a major role in cancer pathogenesis.
Insights
Cancer cells evade programmed cell death (PCD), including autophagy regulated by BECN1. This study investigated BECN1 gene mutations in various human cancers, finding them to be rare and likely not a major driver of cancer development.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Evasion of programmed cell death (PCD) is a hallmark of cancer.
- Autophagy is a key mechanism of PCD, regulated by BECN1 protein.
- The BECN1 gene is a haploinsufficient tumor suppressor, but its mutation status in human cancers is largely unknown.
Purpose of the Study:
- To investigate the frequency and potential role of somatic mutations in the BECN1 gene in human cancer development.
- To analyze the BECN1 gene for mutations across a spectrum of common human malignancies.
Main Methods:
- Analysis of the entire coding region and splice sites of the BECN1 gene.
- Utilized single-strand conformation polymorphism (SSCP) and DNA sequencing.
- Mutations were screened in 180 gastric, 94 breast, 50 acute leukemia, 50 colorectal, 50 hepatocellular, and 124 non-small cell lung cancers.
Main Results:
- Eleven somatic mutations in the BECN1 gene were detected across gastric, colorectal, lung, and breast carcinomas.
- Three missense mutations (N8K, P350R, R389C) were identified in coding sequences.
- Functional analysis showed two mutations (P350R, R389C) had only slightly reduced cell death activity compared to wild-type BECN1.
Conclusions:
- This is the first report of BECN1 gene mutations in human cancer tissues.
- Somatic point mutations in BECN1 appear to be rare events in common human cancers.
- BECN1 mutations likely do not play a significant role in the pathogenesis of most human cancers.
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