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Updated: Jul 13, 2026

Malachite Green Assay for the Discovery of Heat-Shock Protein 90 Inhibitors
Published on: January 20, 2023
IPI-504, a novel and soluble HSP-90 inhibitor, blocks the unfolded protein response in multiple myeloma cells
Jon Patterson1, Vito J Palombella, Christian Fritz
1Infinity Pharmaceuticals, Inc., 780 Memorial Drive, Cambridge, MA 02139, USA.
Background:
Inhibitors of heat shock protein (Hsp) 90 induce apoptosis in multiple myeloma (MM) cells, but the molecular mechanisms underlying this cytotoxic outcome are not clear. Here, we investigate the effect of IPI-504, a novel and highly soluble inhibitor of the Hsp90 ATPase activity, on the unfolded protein response (UPR) in MM cells. The UPR is a stress response pathway triggered by sensors located at the endoplasmic reticulum (ER) membrane whose function is to reduce an excessive accumulation of misfolded protein in the ER. During normal development of B-lymphocytes to antibody-producing plasma cells, a partial UPR has been described, where IREalpha and ATF-6 are stimulated, whereas the third sensor, PERK, is not induced.
Methods:
Levels of the activated forms of the three main UPR sensors ATF-6, XBP-1 and PERK/eIF-2 were monitored in two different MM cells lines and one non-MM cell lines under various experimental conditions including incubation with increasing concentration of IPI-504. Also, MM cells were incubated with IPI-504 and several apoptosis markers were monitored.
Results:
We show here that a partial UPR is constitutively activated in plasma cell-derived MM cells and that IPI-504 can potently inhibit this pathway. IPI-504 achieves this by inactivating the transcription factors XBP1 and ATF6. In addition, IPI-504 also blocks the tunicamycin-induced phosphorylation of eIF2 by PERK. Dose-response and time course experiments reveal that IPI-504's inhibitory effect on the UPR parallels its cytotoxic and pro-apoptotic effects on MM cells.
Conclusion:
The results presented here suggest that the IPI-504-induced apoptosis might be, in part, mediated by the inhibition of the partial UPR. Other malignancies that rely on intact and efficient UPR to survive could be considered as new indications for Hsp90 inhibitors.
Insights
Heat shock protein 90 (Hsp90) inhibitors like IPI-504 induce apoptosis in multiple myeloma (MM) cells by inhibiting the unfolded protein response (UPR). This study clarifies the mechanism by which Hsp90 inhibition impacts UPR signaling in MM cells.
Area of Science:
- Oncology
- Molecular Biology
- Cellular Stress Response
Background:
- Heat shock protein 90 (Hsp90) inhibitors induce apoptosis in multiple myeloma (MM) cells, but the precise mechanisms remain unclear.
- The unfolded protein response (UPR) is a cellular stress pathway that mitigates endoplasmic reticulum (ER) protein overload.
- A partial UPR is observed during normal plasma cell differentiation, involving ATF-6 and IRE1alpha activation.
Purpose of the Study:
- To investigate the effect of IPI-504, an Hsp90 ATPase inhibitor, on the UPR in MM cells.
- To elucidate the molecular mechanisms linking Hsp90 inhibition to apoptosis in MM.
Main Methods:
- Monitoring UPR sensor activation (ATF-6, XBP-1, PERK/eIF-2) in MM and non-MM cell lines treated with IPI-504.
- Assessing apoptosis markers in MM cells following IPI-504 treatment.
- Conducting dose-response and time-course experiments.
Main Results:
- A partial UPR is constitutively active in MM cells and is potently inhibited by IPI-504.
- IPI-504 inactivates transcription factors XBP1 and ATF6, and inhibits PERK-mediated eIF2 phosphorylation.
- The inhibition of UPR by IPI-504 correlates with its cytotoxic and pro-apoptotic effects on MM cells.
Conclusions:
- IPI-504-induced apoptosis in MM cells may be partly mediated by UPR inhibition.
- Hsp90 inhibitors could be effective in other malignancies dependent on UPR for survival.
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