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Updated: Jul 13, 2026

Simultaneous Electrophysiological Recording and Calcium Imaging of Suprachiasmatic Nucleus Neurons
Published on: December 8, 2013
Phase differences between SCN neurons and their role in photoperiodic encoding; a simulation of ensemble patterns
J Rohling1, J H Meijer, H T VanderLeest
1Leiden University Medical Center, Department of Molecular Cell Biology, Lab for Neurophysiology, Postal Zone S5-P, P.O. Box 9600, 2300 RC Leiden, The Netherlands.
Abstract:
In mammals, a major circadian pacemaker is located in the suprachiasmatic nuclei (SCN), at the base of the anterior hypothalamus. The pacemaker controls daily rhythms in behavioral, physiological and endocrine functions and is synchronized to the external light-dark cycle via the retinohypothalamic tract. The SCN are also involved in photoperiodic processes. Changes in day-length are perceived by the SCN, and result in a compression or decompression of the SCN ensemble pattern, which appears to be effectuated by changes in phase relationship among oscillating neurons. By simulation experiments, we have previously shown that the duration of the single unit activity pattern is of minor importance for the broadness of the population activity peak. Instead, the phase distribution among neurons is leading to substantial differences in the broadness of the population pattern. We now show that the combination of (i) changes in the single unit activity pattern and (ii) changes in the phase distribution among oscillating neurons is also effective to encode photoperiodic information. Moreover, we simulated the ensemble waveform of the SCN with recently recorded single unit electrical activity patterns of mice under long and short photoperiods. We show that these single unit activity patterns cannot account for changes in the population waveform of the SCN unless their phase distribution is changed. A narrow distribution encodes for short photoperiods, while a wider distribution is required to encode long photoperiods. The present studies show that recorded patterns in single unit activity rhythms, measured under long and short day conditions, can be used in simulation experiments and are informative in showing which attributes of the neuronal discharge patterns leads to the capacity of the SCN to encode photoperiod.
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