Base excision repair modulation as a risk factor for human cancers

Barbara Tudek1

  • 1Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland. tudek@ibb.waw.pl

Insights

DNA repair pathways are crucial for preventing cancer. Specific base excision repair (BER) pathways are reduced in cancer patients, indicating a potential role in cancer development and risk.

Area of Science:

  • Molecular Biology
  • Genetics
  • Oncology

Background:

  • Oxidative DNA damage and its repair are implicated in human diseases, particularly cancer.
  • Base excision repair (BER) is the primary pathway for repairing oxidative DNA damage.
  • Deficiencies in specific BER pathways are observed in cancer patients and may represent risk factors.

Purpose of the Study:

  • To investigate the role of specific base excision repair (BER) pathways in cancer development.
  • To identify potential biomarkers for cancer risk based on BER pathway function.

Main Methods:

  • Functional assays in blood leukocytes of cancer patients and controls.
  • Analysis of DNA damage repair, including 8-oxoguanine (8-oxoG) and ethenoadenine (epsilonA) repair.
  • Examination of the influence of gene polymorphisms, protein interactions, and post-translational modifications on BER activity.

Main Results:

  • Decreased activity of specific BER pathways, such as 8-oxoG repair and epsilonA repair, was observed in cancer patients.
  • Reduced excision of lipid peroxidation-induced DNA damage (epsilonA and epsilonC) was noted in individuals developing lung adenocarcinoma.
  • BER protein activity is influenced by gene polymorphisms, interactions, and modifications, affecting cancer risk.

Conclusions:

  • Impaired BER pathways, particularly in response to oxidative and lipid peroxidation damage, are associated with increased cancer risk.
  • Gene polymorphisms in BER components can modulate cancer risk, especially for inflammation- and tobacco-related cancers.
  • Modulating BER enzyme activity presents a potential strategy for cancer prevention and treatment.

Related Concept Videos

Base Excision Repair01:54

Base Excision Repair

One of the common DNA damages is the chemical alteration of single bases by alkylation, oxidation, or deamination. The altered bases cause mispairing and strand breakage during replication. This type of damage causes minimal change to the DNA double helix structure and can be repaired by the base excision repair (BER) pathways. BER corrects damaged DNA sequences by removing the damaged base and restoring the original base sequence using the complementary strand as a template.
The first step of...
Base Excision Repair01:54

Base Excision Repair

One of the common DNA damages is the chemical alteration of single bases by alkylation, oxidation, or deamination. The altered bases cause mispairing and strand breakage during replication. This type of damage causes minimal change to the DNA double helix structure and can be repaired by the base excision repair (BER) pathways. BER corrects damaged DNA sequences by removing the damaged base and restoring the original base sequence using the complementary strand as a template.
The first step of...
Nucleotide Excision Repair01:38

Nucleotide Excision Repair

DNA Distortion and Damage
Cells are regularly exposed to mutagens—factors in the environment that can damage DNA and generate mutations. UV radiation is one of the most common mutagens and is estimated to introduce a significant number of changes in DNA. These include bends or kinks in the structure, which can block DNA replication or transcription. If these errors are not fixed, the damage can cause mutations, which in turn can result in cancer or disease depending on which sequences are...
Nucleotide Excision Repair01:08

Nucleotide Excision Repair

Overview
Nucleotide Excision Repair01:08

Nucleotide Excision Repair

Overview
Long-patch Base Excision Repair01:02

Long-patch Base Excision Repair

Since the discovery of the two BER pathways, there has been a debate about how a cell chooses one pathway over the other and the factors determining this selection. Numerous in vitro experiments have pointed out multiple determinants for the sub-pathway selection. These are: