Design of MRI scan protocols for use in 3-D, CT-based treatment planning

MRI has the potential of providing the radiation therapy treatment planner with new insights into the definition of target and normal tissue volumes to augment CT in 3-D treatment planning. The current speed of MR scan sequences is not sufficient to enable the acquisition of both T1 and T2 weighted images in all three orthogonal planes in a reasonable period of time. Therefore, compromises must be made in the design of protocols specifically for use in radiotherapy planning which: (1) provide enough information to readily enable image registration; (2) preserve the three-dimensionality provided by image acquisition directly in coronal and sagittal planes; (3) yield tissue contrast as well as tumor specificity (where available); but (4) can be completed in a short enough span of time (or with enough checks) that the patient position is not compromised. Protocols designed for use in planning treatment of the brain, head and neck, lung, prostate, cervix, and sarcomas are presented.