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Updated: Jul 13, 2026

Energy Dispersive X-ray Tomography for 3D Elemental Mapping of Individual Nanoparticles
Published on: July 5, 2016
Three-dimensional elemental mapping of phosphorus by quantitative electron spectroscopic tomography (QuEST)
M A Aronova1, Y C Kim, R Harmon
1Laboratory of Bioengineering and Physical Science, NIBIB, National Institutes of Health, Bethesda, MD 20892, USA.
Quantitative electron spectroscopic tomography (QuEST) offers 3-D elemental mapping at the nanoscale. This technique accurately quantifies phosphorus distribution in cellular structures like ribosomes and chromatin.
Area of Science:
- Materials Science
- Cell Biology
- Nanotechnology
Background:
- Accurate nanoscale elemental distribution is crucial for understanding cellular processes.
- Existing methods lack the resolution and quantification needed for detailed cellular analysis.
Purpose of the Study:
- To develop and validate a novel technique, quantitative electron spectroscopic tomography (QuEST), for 3-D elemental mapping at the nanometer scale.
- To demonstrate QuEST's capability in mapping phosphorus distribution within unstained cellular components.
Main Methods:
- Acquisition of 2-D elemental maps from energy filtering transmission electron microscopy images at various specimen tilt angles.
- Reconstruction of 3-D elemental distributions using an algorithm based on the simultaneous iterative reconstruction technique (SIRT).
- Correction for plural inelastic scattering using unfiltered and zero-loss images, and automated correction for specimen drift and focus changes.
Main Results:
- Successful mapping of phosphorus distribution in unstained, embedded cell sections.
- Accurate quantification of phosphorus content in cellular ribosomes.
- Estimation of nucleic acid density within the cell nucleus.
Conclusions:
- QuEST provides a powerful tool for quantitative 3-D elemental analysis at the nanometer scale.
- The technique achieves high sensitivity, detecting as few as 20 phosphorus atoms in a 2.7 nm voxel.
- QuEST enables detailed investigation of elemental composition in biological systems.
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