Related Experiment Video
Updated: Jul 13, 2026

12:02
Transient Gene Expression in Tobacco using Gibson Assembly and the Gene Gun
Published on: April 18, 2014
Plant pre-tRNA splicing enzymes are targeted to multiple cellular compartments
Markus Englert1, Andreas Latz, Dirk Becker
1Institute of Biochemistry, Biocenter, University of Würzburg, Am Hubland, D-97074, Würzburg, Germany.
Biochimie
|August 19, 2007
Summary
Plant pre-tRNA splicing enzymes are primarily nuclear, but tRNA ligase and 2'-phosphotransferase also localize to chloroplasts and mitochondria. Differential targeting suggests diverse roles beyond canonical splicing.
Area of Science:
- Molecular Biology
- Plant Biochemistry
- Organelle Biology
Background:
- Pre-tRNA splicing is crucial for tRNA maturation, involving endonuclease, RNA ligase, and 2 -phosphotransferase.
- Subcellular localization of these enzymes varies across eukaryotes (nucleus in vertebrates, cytoplasm in yeast).
Purpose of the Study:
- To determine the subcellular localization of plant pre-tRNA splicing enzymes.
- To investigate the functional implications of observed enzyme localization in plants.
Main Methods:
- Transient expression of plant splicing enzymes fused to Green Fluorescent Protein (GFP) in Allium epidermal and Vicia guard cells.
- Confocal microscopy and colocalization studies using MitoTracker Red.
- Analysis of mutated constructs to assess targeting mechanisms.
Main Results:
- All three classes of splicing enzymes (endonuclease, tRNA ligase, 2 -phosphotransferase) from Arabidopsis and Oryza localize to the nucleus.
- tRNA ligase and 2 -phosphotransferase possess N-terminal chloroplast transit signals, directing them to chloroplasts and proplastids.
- 2 -phosphotransferase also associates with mitochondria, confirmed by colocalization.
Conclusions:
- Plant pre-tRNA splicing predominantly occurs in the nucleus.
- tRNA ligase and 2 -phosphotransferase have dual roles, potentially involved in chloroplast/mitochondrial tRNA repair or atypical intron splicing.
- Alternative translation initiation is a mechanism for differential targeting of these enzymes.
Related Concept Videos
RNA Splicing
Splicing is the process by which eukaryotic RNA is edited before its translation into protein. The RNA strand transcribed from eukaryotic DNA is called the primary transcript. The primary transcripts that become mRNAs are called precursor messenger RNAs (pre-mRNAs). Eukaryotic pre-mRNA contains alternating sequences of exons and introns. Exons are nucleotide sequences that code for proteins, whereas introns are the non-coding regions. In RNA splicing, introns are removed and exons are bonded...
RNA Splicing
Splicing is the process by which eukaryotic RNA is edited before its translation into protein. The RNA strand transcribed from eukaryotic DNA is called the primary transcript. The primary transcripts that become mRNAs are called precursor messenger RNAs (pre-mRNAs). Eukaryotic pre-mRNA contains alternating sequences of exons and introns. Exons are nucleotide sequences that code for proteins, whereas introns are the non-coding regions. In RNA splicing, introns are removed and exons are bonded...
Alternative RNA Splicing
Alternative RNA splicing is the regulated splicing of exons and introns to produce different mature mRNAs from a single pre-mRNA. Unlike in constitutive splicing where a single gene produces a single type of mRNA, alternative splicing allows an organism to produce multiple proteins from a single gene and plays an important role in protein diversity.
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
Protein Transport to the Stroma
Chloroplasts are triple membrane structures with an outer membrane, an inner membrane, and a thylakoid membrane, each containing distinct metabolite transporters, membrane translocons, and enzymes. Appropriate sorting and translocating these proteins to their correct membrane systems is essential for chloroplast function.
Protein complexes called the translocon of the outer chloroplast membrane or TOC complex, and the translocon of the inner chloroplast membrane or TIC complex mediate the...
Protein complexes called the translocon of the outer chloroplast membrane or TOC complex, and the translocon of the inner chloroplast membrane or TIC complex mediate the...
Overview of Protein Sorting and Transport
Eukaryotic cells have different membrane-bound organelles with distinct protein requirements. The process by which proteins are targeted to a specific organelle is called protein sorting.
Protein sorting can be of two types: signal-based sorting and vesicle-based trafficking. In signal-based sorting, specific amino acid sequences called sorting signals target proteins to the proper location inside the cell either via gated transport or by protein translocation. In gated transport, folded...
Protein sorting can be of two types: signal-based sorting and vesicle-based trafficking. In signal-based sorting, specific amino acid sequences called sorting signals target proteins to the proper location inside the cell either via gated transport or by protein translocation. In gated transport, folded...
Overview of Transposition and Recombination
Transposons make up a significant part of genomes of various organisms. Therefore, it is believed that transposition played a major evolutionary role in speciation by changing genome sizes and modifying gene expression patterns. For example, in bacteria, transposition can lead to conferring antibiotic resistance. Movement of transposable elements within the genetic pool of pathogenic bacteria can aid in transfer of antibiotic-resistant genetic elements. In eukaryotes, transposons can carry out...
