Related Experiment Video
Updated: Jul 13, 2026

Structural Biology and Analytical Chemistry Approaches for Characterizing C-Glycoside Metabolic Enzymes in Human Gut Microbiota
Published on: May 23, 2025
Crystal structure of human DGCR8 core
Sun Young Sohn1, Won Jin Bae, Jeong Joo Kim
1National Creative Research Center for Structural Biology and Department of Life Science, Pohang University of Science and Technology, Hyo-ja dong, San31, Pohang, KyungBook 790-784, South Korea.
The DGCR8 protein, crucial for microRNA maturation, binds pri-miRNA substrates. Its structure reveals how DGCR8 recognizes these substrates, enabling microRNA processing.
Area of Science:
- Molecular Biology
- Structural Biology
- Biochemistry
Background:
- The Drosha-DGCR8 complex initiates microRNA (miRNA) maturation by cleaving primary miRNA (pri-miRNA).
- Drosha possesses the catalytic activity, while DGCR8 (or Pasha) anchors the pri-miRNA substrate.
- Understanding DGCR8's substrate recognition mechanism is key to elucidating miRNA biogenesis.
Purpose of the Study:
- To determine the crystal structure of the human DGCR8 core (DGCR8S).
- To elucidate the molecular basis of pri-miRNA recognition by DGCR8.
- To propose a model for DGCR8-pri-miRNA interaction.
Main Methods:
- X-ray crystallography to determine the structure of human DGCR8 core (residues 493-720).
- Fluorescent resonance energy transfer (FRET) analysis.
- Site-directed mutagenesis studies.
Main Results:
- The crystal structure revealed a pseudo two-fold symmetry in the arrangement of DGCR8's two double-stranded RNA-binding domains (dsRBDs).
- The H2 helix within each dsRBD was identified as critical for pri-miRNA substrate recognition.
- Structural and biochemical data suggest DGCR8 recognizes pri-miRNA in two distinct orientations.
Conclusions:
- The determined structure provides insights into the molecular architecture of the DGCR8 core.
- DGCR8 employs its dsRBDs, particularly the H2 helix, for pri-miRNA binding.
- A model for DGCR8-mediated pri-miRNA recognition is proposed, advancing understanding of miRNA processing.
Related Concept Videos
Nucleic Acid Structure
DNA Structure
DNA has a double-helix structure. The...
X-ray Crystallography
Diffraction
Diffraction is the change in the direction of travel experienced by an electromagnetic wave when it encounters a physical barrier whose dimensions are comparable to those of the wavelength of the light. X-rays are electromagnetic radiation with wavelengths about as long as the distance between neighboring...
Structure of Cadherins
Determination of Crystal Structures
Antibody Structure
Antibodies, also known as immunoglobulins (Ig), are essential players of the adaptive immune system. These antigen-binding proteins are produced by B cells and make up 20 percent of the total blood plasma by weight. In mammals, antibodies fall into five different classes, which each elicits a different biological response upon antigen binding.
The Y-Shaped Structure of Antibodies Consists of Four Polypeptide Chains
Antibodies consist of four polypeptide chains: two identical heavy...
Antibody Structure
Antibodies, also known as immunoglobulins (Ig), are essential players of the adaptive immune system. These antigen-binding proteins are produced by B cells and make up 20 percent of the total blood plasma by weight. In mammals, antibodies fall into five different classes, which each elicits a different biological response upon antigen binding.
The Y-Shaped Structure of Antibodies Consists of Four Polypeptide Chains
Antibodies consist of four polypeptide chains: two identical heavy...

