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A Reporter Assay to Analyze Intronic microRNA Maturation in Mammalian Cells
Published on: June 16, 2022
Regulation of H-ras splice variant expression by cross talk between the p53 and nonsense-mediated mRNA decay pathways
Jérôme Barbier1, Martin Dutertre, Danielle Bittencourt
1INSERM U685, Equipe AVENIR, Hopital Saint-Louis, 1 Avenue Claude Vellefaux, Paris 75010, France.
Abstract:
When cells are exposed to a genotoxic stress, a DNA surveillance pathway that involves p53 is activated, allowing DNA repair. Eukaryotic cells have also evolved a mechanism called mRNA surveillance that controls the quality of mRNAs. Indeed, mutant mRNAs carrying premature translation termination codons (PTCs) are selectively degraded by the nonsense-mediated mRNA decay (NMD) pathway. However, in the case of particular genes, such as proto-oncogenes, mutations that do not create PTCs and therefore that do not induce mRNA degradation, can be harmful to cells. In this study, we showed that the H-ras gene in the absence of mutations produces an NMD-target splice variant that is degraded in the cytosol. We observed that a treatment with the genotoxic stress inducer camptothecin for 6 h favored the production of the H-ras NMD-target transcript degraded in the cytosol by the NMD process. Our data indicated that the NMD process allowed the elimination of transcripts produced in response to a short-term treatment with camptothecin from the major proto-oncogene H-ras, independently of PTCs induced by mutations. The camptothecin effects on H-ras gene expression were p53 dependent and involved in part modulation of the SC35 splicing factor. Interestingly, a long-term treatment with camptothecin as well as p53 overexpression for 24 h resulted in the accumulation of the H-ras NMD target in the cytosol, although the NMD process was not completely inhibited as other NMD targets are not stabilized. Finally, Upf1, a major NMD effector, was necessary for optimal p53 activation by camptothecin, which is consistent with recent data showing that NMD effectors are required for genome stability. In conclusion, we identified cross talk between the p53 and NMD pathways that regulates the expression levels of H-ras splice variants.
Insights
Genotoxic stress activates DNA repair pathways. This study reveals that the nonsense-mediated mRNA decay (NMD) pathway regulates H-ras splice variants, interacting with p53 for genome stability.
Area of Science:
- Molecular Biology
- Cell Biology
- Genetics
Background:
- Genotoxic stress activates DNA repair via p53.
- mRNA surveillance mechanisms like nonsense-mediated mRNA decay (NMD) ensure mRNA quality.
- Mutations in proto-oncogenes can be harmful, even without premature translation termination codons (PTCs).
Purpose of the Study:
- To investigate the regulation of H-ras splice variants under genotoxic stress.
- To explore the interplay between the p53 and NMD pathways in controlling H-ras expression.
- To determine the role of NMD in eliminating potentially harmful H-ras transcripts.
Main Methods:
- Treatment of cells with camptothecin (a genotoxic stress inducer).
- Analysis of H-ras splice variant production and degradation.
- Assessment of p53 activation and modulation of splicing factors (e.g., SC35).
- Investigation of the role of NMD effectors like Upf1.
Main Results:
- Camptothecin treatment induced an NMD-target H-ras splice variant degraded in the cytosol.
- This NMD-mediated degradation occurred independently of PTCs and was p53-dependent.
- Both long-term camptothecin treatment and p53 overexpression led to H-ras NMD target accumulation.
- Upf1 was essential for optimal p53 activation by camptothecin.
Conclusions:
- The NMD pathway regulates H-ras splice variants, eliminating transcripts produced under short-term genotoxic stress.
- Cross-talk exists between the p53 and NMD pathways, influencing H-ras expression.
- NMD effectors contribute to genome stability by modulating p53 activation.
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