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Published on: August 24, 2013
Mutational interference and the progression of Muller's ratchet when mutations have a broad range of deleterious
R Jonas Söderberg1, Otto G Berg
1Department of Molecular Evolution, The Evolutionary Biology Centre, University of Uppsala, SE-75236 Uppsala, Sweden.
Abstract:
Deleterious mutations can accumulate in asexual haploid genomes through the process known as Muller's ratchet. This process has been described in the literature mostly for the case where all mutations are assumed to have the same effect on fitness. In the more realistic situation, deleterious mutations will affect fitness with a wide range of effects, from almost neutral to lethal. To elucidate the behavior of the ratchet in this more realistic case, simulations were carried out in a number of models, one where all mutations have the same effect on selection [one-dimensional (1D) model], one where the deleterious mutations can be divided into two groups with different selective effects [two-dimensional (2D) model], and finally one where the deleterious effects are distributed. The behavior of these models suggests that deleterious mutations can be classified into three different categories, such that the behavior of each can be described in a straightforward way. This makes it possible to predict the ratchet rate for an arbitrary distribution of fitness effects using the results for the well-studied 1D model with a single selection coefficient. The description was tested and shown to work well in simulations where selection coefficients are derived from an exponential distribution.
Insights
Muller's ratchet, the accumulation of harmful mutations in asexual genomes, is better understood when considering varied mutation effects. This study categorizes these effects to predict mutation accumulation rates more accurately.
Area of Science:
- Evolutionary Biology
- Genetics
- Computational Biology
Background:
- Muller's ratchet describes the irreversible accumulation of deleterious mutations in asexual populations.
- Previous models often assumed uniform fitness effects of mutations, which is unrealistic.
- Realistically, deleterious mutations exhibit a wide spectrum of fitness impacts, from minor to lethal.
Purpose of the Study:
- To investigate the impact of varied deleterious mutation effects on Muller's ratchet.
- To develop a predictive framework for mutation accumulation rates under diverse fitness effect distributions.
- To simplify the complex behavior of Muller's ratchet by categorizing mutation effects.
Main Methods:
- Computer simulations were employed using one-dimensional (1D), two-dimensional (2D), and distributed fitness effect models.
- The models simulated the accumulation of deleterious mutations with uniform, bimodal, and continuous distributions of selective effects.
- Analysis focused on predicting the rate of Muller's ratchet based on mutation effect categories.
Main Results:
- Deleterious mutations can be effectively classified into three distinct categories based on their fitness effects.
- This categorization allows for a straightforward description of the ratchet's behavior across different fitness effect distributions.
- The predictive framework accurately estimated ratchet rates, particularly when tested with exponentially distributed selection coefficients.
Conclusions:
- A simplified, categorized approach can accurately model Muller's ratchet with varied mutation effects.
- The findings provide a method to predict mutation accumulation rates for any distribution of fitness effects.
- This research enhances our understanding of genome evolution in asexual organisms facing mutation load.
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