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Bacterial Phylum Verrucomicrobiota01:26

Bacterial Phylum Verrucomicrobiota

The phylum Verrucomicrobiota comprises at least four characterized orders, with most species classified within the order Verrucomicrobiotales. Members of this phylum are either aerobic or facultatively aerobic, with the ability to ferment sugars. A notable exception is the genus Methylacidiphilum, which consists of aerobic methanotrophs. Additionally, some Verrucomicrobiota establish symbiotic relationships with protists. These bacteria are widely distributed across various environments,...
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Bacterial Flora of the Large Intestine

The gut microbiome is formed by a vast and diverse community of bacteria that colonizes our large intestine. These bacteria start residing in the gut from birth and continue diversifying throughout life, influenced by factors such as diet, lifestyle, and stress. The gut bacterial community also includes bacteria from food and those that enter the colon through the anus.
The normal gut flora of the colon plays a critical role in generating essential vitamins such as vitamins K, B5, and B7.
Bacterial Phylum Firmicutes01:27

Bacterial Phylum Firmicutes

Firmicutes is a diverse phylum of Gram-positive bacteria characterized by a low GC content in their genomes. This phylum includes organisms with monoderm or diderm cell envelopes, highlighting a complex evolutionary history. Firmicutes comprises several major orders, including Lactobacillales, Clostridiales, and Bacillales, which exhibit remarkable diversity in their morphology, metabolism, and ecological roles.The order Lactobacillales includes lactic acid bacteria, which are fermentative...
Bacterial Phylum Bacteroidota01:26

Bacterial Phylum Bacteroidota

The phylum Bacteroidota includes over 700 species classified into four primary orders: Bacteroidales, Cytophagales, Flavobacteriales, and Sphingobacteriales. These gram-negative, non-sporulating rods exhibit saccharolytic capabilities and can be aerobic or fermentative, encompassing obligate aerobes, facultative aerobes, and obligate anaerobes. Many species display gliding motility, though some are nonmotile or use flagella. The genus Bacteroides is well-studied due to its significant role in...
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The human body harbors a vast and diverse viral community known as the human virome. The virome includes bacteriophages that infect bacteria, and eukaryotic viruses that infect human cells. Transient dietary and environmental viruses also contribute to this dynamic ecosystem. Estimates suggest the human body may contain on the order of 10¹³ viral particles, though abundance varies widely by body site and detection method.Comprehensive characterization of the virome has become possible only with...
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vanD and vanG-like gene clusters in a Ruminococcus species isolated from human bowel flora.

M-C Domingo1, A Huletsky, R Giroux

  • 1Centre de Recherche en Infectiologie de l'Université Laval, CHUQ, 2705 boul. Laurier, Québec, Québec G1V 4G2, Canada.

Antimicrobial Agents and Chemotherapy
|August 29, 2007
PubMed
Summary

A novel anaerobic bacterium, strain CCRI-16110, was identified harboring vancomycin resistance genes vanD and vanG. This discovery suggests anaerobic bacteria may act as reservoirs for these critical resistance genes in the human gut.

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Area of Science:

  • Microbiology
  • Genetics
  • Antimicrobial Resistance

Background:

  • Vancomycin-resistant enterococci (VRE) are a significant healthcare concern.
  • Hospital surveillance programs aim to detect carriers of VRE.
  • Anaerobic bacteria are increasingly recognized for their role in the human microbiome.

Purpose of the Study:

  • To identify and characterize a novel vancomycin-resistant anaerobic bacterium isolated from a human fecal specimen.
  • To investigate the genetic basis of vancomycin resistance in this novel isolate.
  • To assess the potential role of anaerobic bacteria as reservoirs for vancomycin resistance genes.

Main Methods:

  • Isolation and identification of anaerobic bacteria from human fecal samples.
  • 16S rRNA gene sequencing for species identification.
  • Determination of vancomycin and teicoplanin resistance by MIC testing.
  • Whole-genome sequencing to analyze vancomycin resistance gene clusters (vanD and vanG-like).
  • Comparative sequence analysis of identified genes with known resistance determinants.

Main Results:

  • A vancomycin-resistant, anaerobic, gram-positive coccus (strain CCRI-16110) was isolated.
  • 16S rRNA gene sequencing suggested a novel Ruminococcus species.
  • Strain CCRI-16110 exhibited high resistance to vancomycin and teicoplanin (MICs >256 µg/ml).
  • The vanD gene cluster, including vanD1 and intD, was identified and highly similar to Enterococcus faecium.
  • A partial vanG-like gene cluster encoding putative VanS(G), VanG, and VanT(G) proteins was also found.

Conclusions:

  • This study reports the first isolation of an anaerobic bacterium harboring the vanD gene cluster.
  • The novel strain also contains a vanG-like gene cluster, suggesting a dual resistance mechanism.
  • The presence of vanD and vanG genes in anaerobic gut bacteria highlights their potential as reservoirs for vancomycin resistance.
  • Further research is needed to understand the transmission dynamics and clinical implications of vancomycin resistance in anaerobic bacteria.