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Preparation of Mycobacterium tuberculosis Culture Filtrate to Understand TB Pathogenesis
Published on: March 28, 2025
Variation of the expression of Mycobacterium tuberculosis ppe44 gene among clinical isolates
Laura Rindi1, Irene Peroni, Nicoletta Lari
1Dipartimento di Patologia Sperimentale, Biotecnologie Mediche, Infettivologia ed Epidemiologia, Università di Pisa, Pisa, Italy. rindi@biomed.unipi.it
Abstract:
PPE44 is a member of the Mycobacterium tuberculosis PPE proteins, a polymorphic family of 69 glycine-rich proteins that predictively represent a source of antigenic variation. The genetic diversity of gene ppe44 among clinical isolates has been studied. No genomic polymorphism of ppe44 was found by a PCR-restriction fragment length polymorphism assay using three restriction enzymes. Nucleotide sequencing of gene ppe44 of a number of isolates, selected to represent the major phylogenetic lineages of M. tuberculosis, showed no nucleotide substitution, with the exception of isolates of the Beijing genotype. These findings indicate that gene ppe44 is basically conserved among M. tuberculosis strains. The expression of gene ppe44 was then determined at the transcriptional level by a real-time reverse transcriptase PCR assay. Extremely high quantitative variations in ppe44 expression were found among the isolates; ppe44 expression of the Beijing strains was significantly higher than the non-Beijing strains. To test whether differential expression of gene ppe44 has the potential to provide a dynamic antigen display, antibodies to PPE44 were titered in the sera of M. tuberculosis-infected subjects. Variation of antibody response to PPE44 was found with regard to both antibody titers and the proportion of responding subjects. These results indicate that the differential expression of genes ppe could influence the host's immune responsiveness, thus having implications in the immunopathogenesis of tuberculosis.
Insights
Mycobacterium tuberculosis gene ppe44 is conserved across strains but shows significant expression variation, particularly in Beijing genotypes. This differential expression impacts host immune response and tuberculosis immunopathogenesis.
Area of Science:
- Microbiology
- Immunology
- Genetics
Background:
- PPE proteins are a polymorphic family in Mycobacterium tuberculosis, potentially involved in antigenic variation.
- The PPE44 protein is a member of this family, and its genetic diversity was investigated.
Purpose of the Study:
- To investigate the genetic diversity of the ppe44 gene in Mycobacterium tuberculosis clinical isolates.
- To analyze the transcriptional expression levels of ppe44 across different M. tuberculosis strains.
- To explore the correlation between ppe44 expression and host immune response in tuberculosis patients.
Main Methods:
- PCR-restriction fragment length polymorphism (PCR-RFLP) assay.
- Nucleotide sequencing of the ppe44 gene.
- Real-time reverse transcriptase PCR (RT-PCR) for gene expression analysis.
- Antibody titration in patient sera.
Main Results:
- The ppe44 gene showed no genomic polymorphism, indicating it is conserved among M. tuberculosis strains, except for the Beijing genotype.
- Significant quantitative variations in ppe44 gene expression were observed, with higher expression in Beijing strains.
- Variations in antibody titers against PPE44 were detected in infected subjects, suggesting differential immune responses.
Conclusions:
- The ppe44 gene is largely conserved in Mycobacterium tuberculosis, but its expression varies significantly between strains.
- Differential expression of ppe44 may influence host immune responsiveness.
- These findings have implications for understanding the immunopathogenesis of tuberculosis.
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