Related Experiment Video
Updated: Jul 12, 2026

Preparation of SNS Cobalt(II) Pincer Model Complexes of Liver Alcohol Dehydrogenase
Published on: March 19, 2020
Seven-coordination versus six-coordination in divalent first-row transition-metal complexes derived from
Lea Vaiana1, Martín Regueiro-Figueroa, Marta Mato-Iglesias
1Departamento de Química Fundamental, Universidade da Coruña, Campus da Zapateira, Alejandro de la Sota 1, 15008 A Coruña, Spain.
Abstract:
The complexes of the heptadentate receptor N,N'-bis(benzimidazol-2-ylmethyl)-1,10-diaza-15-crown-5 (L2) with MnII, CoII, NiII, CuII, and ZnII are reported. The X-ray crystal structures of the ZnII and NiII complexes show that whereas the ZnII ion is seven-coordinated in a (distorted) pentagonal-bipyramidal coordination environment, the NiII ion is only six-coordinated in a distorted octahedral coordination environment. Theoretical calculations on the [M(L2)]2+ systems (M = Mn, Co, Ni, Cu, or Zn) performed at the density functional theory (DFT; B3LYP) level have been used to obtain information about the structure and electronic properties of these complexes, as well as to rationalize their preferences for a pentagonal-bipyramidal or an octahedral coordination. We have found that for the MnII, CoII, CuII, and ZnII complexes, geometry optimizations lead systematically to pentagonal-bipyramidal coordination environments around the metal ions. However, for the NiII complex, two minimum-energy conformations were obtained, with the metal ion being in octahedral (o-[Ni(L2)]2+) or pentagonal-bipyramidal (pb-[Ni(L2)]2+) coordination. The stabilization of the octahedral geometry in the NiII complex can be considered as the result of the Jahn-Teller effect operating in pentagonal-bipyramidal geometry, which in an extreme case leads to an octahedral coordination. Spectrophotometric titrations carried out in dimethyl sulfoxide (DMSO) and CH3CN/DMSO (9:1) solutions indicate the following stability sequence for the complexes of L2: CoII approximately NiII > ZnII > MnII. The variations in the geometry and stability of the complexes may be rationalized in terms of the different occupations of the frontier molecular orbitals along the first-row transition-metal series. Finally, a time-dependent DFT approach was used to investigate the absorption spectrum of the [Cu(L2)]2+ complex based on the optimized geometries at the B3LYP level, also confirming a pentagonal-bipyramidal coordination in solution for this compound.
More Related Videos
10:52Line Shape Analysis of Dynamic NMR Spectra for Characterizing Coordination Sphere Rearrangements at a Chiral Rhenium Polyhydride Complex
Published on: July 27, 2022
09:45Accessing Valuable Ligand Supports for Transition Metals: A Modified, Intermediate Scale Preparation of 1,2,3,4,5-Pentamethylcyclopentadiene
Published on: March 20, 2017
Related Concept Videos
Coordination Number and Geometry
Valence Bond Theory
Coordination Compounds and Nomenclature
Metal-Ligand Bonds
In these complexes, transition metals form coordinate covalent bonds, a kind of Lewis acid-base interaction in which both of the electrons in the bond are contributed by a donor (Lewis base) to an electron acceptor (Lewis acid). The Lewis acid in...
Structural Isomerism
Isomers are different chemical species that have the same chemical formula. Structural isomerism of coordination compounds can be divided into two subcategories, the linkage isomers and coordination-sphere isomers.
Linkage isomers occur when the coordination compound contains a ligand that can bind to the transition metal center through two different atoms. For example, the CN− ligand can bind through the carbon atom or through the nitrogen atom. Similarly, SCN− can be...
Colors and Magnetism
When atoms or molecules absorb light at the proper frequency, their electrons are excited to higher-energy orbitals. For many main group atoms and molecules, the absorbed photons are in the ultraviolet range of the electromagnetic spectrum, which cannot be detected by the human eye. For coordination compounds, the energy difference between the d orbitals often allows photons in the visible range to be absorbed and emitted, which is seen as colors by the human eye.