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Updated: Jul 11, 2026

Direct Restart of a Replication Fork Stalled by a Head-On RNA Polymerase
Published on: April 29, 2010
Tipin is required for stalled replication forks to resume DNA replication after removal of aphidicolin in Xenopus egg
Alessia Errico1, Vincenzo Costanzo, Tim Hunt
1Clare Hall Laboratories, Cancer Research UK, South Mimms, Hertfordshire EN6 3LD, United Kingdom.
Abstract:
Tipin and its interacting partner Tim1 (Timeless) form a complex at replication forks that plays an important role in the DNA damage checkpoint response. Here we identify Xenopus laevis Tipin as a substrate for cyclin E/cyclin-dependent kinases 2 that is phosphorylated in interphase and undergoes further phosphorylation upon entry into mitosis. During unperturbed DNA replication, the Tipin/Tim1 complex is bound to chromatin, and we were able to detect interactions between Tipin and the MCM helicase. Depletion of Tipin from Xenopus extracts did not significantly impair normal replication but substantially blocked the ability of stalled replication forks to recover after removal of a block imposed by aphidicolin. Tipin-depleted extracts also showed defects in the activation of Chk1 in response to aphidicolin, probably because of a failure to load the checkpoint mediator protein Claspin onto chromatin.
Insights
The Tipin/Tim1 complex is crucial for DNA replication fork recovery and checkpoint activation after damage. Phosphorylation of Tipin by cyclin-dependent kinases regulates its function in these processes.
Area of Science:
- Cellular biology
- Molecular biology
- DNA replication and repair
Background:
- The Tipin/Tim1 complex is essential for DNA damage checkpoint response at replication forks.
- Understanding the regulation and function of Tipin is key to comprehending DNA replication fidelity.
Purpose of the Study:
- To investigate the role of Xenopus laevis Tipin in DNA replication and its regulation by cell cycle kinases.
- To elucidate the function of the Tipin/Tim1 complex in replication fork stability and checkpoint activation.
Main Methods:
- Identification of Tipin as a substrate for cyclin E/cyclin-dependent kinases 2.
- Analysis of Tipin phosphorylation during interphase and mitosis.
- Chromatin binding assays for the Tipin/Tim1 complex and its interaction with MCM helicase.
- Xenopus extract depletion experiments to assess Tipin's role in replication recovery and checkpoint activation.
Main Results:
- Xenopus Tipin is phosphorylated by cyclin E/CDK2 in interphase and further in mitosis.
- The Tipin/Tim1 complex associates with chromatin and interacts with the MCM helicase during normal replication.
- Tipin depletion impairs stalled replication fork recovery and Chk1 activation following aphidicolin treatment.
- Failure to load Claspin onto chromatin was observed in Tipin-depleted extracts.
Conclusions:
- Tipin phosphorylation by cyclin E/CDK2 is a regulatory mechanism for its function.
- The Tipin/Tim1 complex is involved in maintaining replication fork stability and facilitating checkpoint activation.
- Tipin plays a critical role in the recovery of stalled replication forks and the DNA damage response pathway.
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