Pure subtelomeric microduplications as a cause of mental retardation
E M Ruiter1, D A Koolen, T Kleefstra
1Department of Human Genetics, Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen Medical Centre, 6500 HB Nijmegen, The Netherlands.
Abstract:
Submicroscopic subtelomeric aberrations are a common cause of mental retardation (MR). New molecular techniques allow the identification of subtelomeric microduplications, but their frequency and significance are largely unknown. We determined the frequency of subtelomeric, pure microduplications in a cohort of 624 patients with MR and/or multiple congenital anomalies using multiplex ligation dependent probe amplification (MLPA) and delineated the identified microduplications using array based comparative genomic hybridization (array CGH). In 11 patients, MLPA revealed a subtelomeric duplication without a concurrent deletion. Additional fluorescence in situ hybridization studies and parental analyses showed that three had occurred de novo: one duplication 5q34qter (12.7 Mb), one duplication 9q34.13qter (7.2 Mb) and one duplication 9p24.2pter (4.1 Mb). Five microduplications (9p, 11q, 12q, 15q and 16p) appeared to be inherited from an unaffected parent, while in three cases (9p, 12p and 17p) the parents were not available for testing. Based on our findings and data from the literature, the three de novo duplications were the only ones likely to be disease-causing, leading to a frequency of pathogenic subtelomeric, pure microduplications of 0.5%. Our study shows that subtelomeric microduplications are an infrequent cause of MR and that additional clinical and family studies are required to assess their clinical significance.
Insights
Subtelomeric microduplications are rare causes of mental retardation (MR), identified in 0.5% of patients. Further research is needed to fully understand the clinical significance of these genetic alterations.
Area of Science:
- Genetics
- Molecular Biology
- Developmental Biology
Background:
- Submicroscopic subtelomeric aberrations are recognized causes of mental retardation (MR).
- The frequency and clinical significance of subtelomeric microduplications remain largely undetermined.
- Advancements in molecular techniques enable the identification of these genetic variations.
Purpose of the Study:
- To determine the frequency of subtelomeric pure microduplications in a cohort of patients with MR and/or multiple congenital anomalies.
- To delineate the identified microduplications using advanced genomic techniques.
- To assess the clinical significance of these genetic findings.
Main Methods:
- Utilized multiplex ligation dependent probe amplification (MLPA) to screen 624 patients for subtelomeric microduplications.
- Employed array based comparative genomic hybridization (array CGH) for precise delineation of identified microduplications.
- Conducted fluorescence in situ hybridization and parental analyses to determine the origin (de novo or inherited) of duplications.
Main Results:
- Identified subtelomeric duplications in 11 patients.
- Confirmed three de novo pathogenic microduplications: 5q34qter (12.7 Mb), 9q34.13qter (7.2 Mb), and 9p24.2pter (4.1 Mb).
- Established the frequency of pathogenic subtelomeric pure microduplications at 0.5% in the studied cohort.
Conclusions:
- Subtelomeric microduplications are an infrequent cause of mental retardation.
- The identified de novo duplications are likely disease-causing.
- Additional clinical and family studies are necessary to fully elucidate the clinical significance of subtelomeric microduplications.
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