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Promoter Capture Hi-C: High-resolution, Genome-wide Profiling of Promoter Interactions
Published on: June 28, 2018
B cell activating factor (BAFF) gene promoter activity depends upon co-activator, p300
1Department of Bioscience and Biotechnology, Sejong University, Seoul 143-747, Republic of Korea. eunyimoon@sejong.ac.kr
Immunobiology
|September 18, 2007
Summary
Mouse B-cell activating factor (BAFF) expression is regulated by promoter activation. NF-kappaB and p300 co-activator cooperate to enhance BAFF promoter activity, influenced by reactive oxygen species (ROS).
Area of Science:
- Immunology
- Molecular Biology
- Cell Biology
Background:
- B-cell activating factor (BAFF) is crucial for mature B cell development and survival.
- Previous studies showed lipopolysaccharide (LPS) increases mouse BAFF (mBAFF) via toll-like receptor 4 (TLR4), reactive oxygen species (ROS), and NF-kappaB activation.
Purpose of the Study:
- To investigate the regulation of mBAFF expression through promoter activation.
- To explore the roles of NF-kappaB and the co-activator p300 in mBAFF promoter activity.
Main Methods:
- Cloning of the mBAFF promoter into a luciferase reporter vector (pGL3-basic).
- Analysis of NF-kappaB binding motifs within the mBAFF promoter.
- Stimulation of Raw 264.7 murine macrophages with LPS, serum deprivation, and hydrogen peroxide (H2O2).
- Treatment with N-acetyl-l-cysteine (NAC) as a ROS scavenger.
- Co-transfection experiments with p65 and p300 (including dominant-negative p300).
- Chromatin immunoprecipitation (ChIP) assay to detect p300 binding to the BAFF promoter.
Main Results:
- A 2.0 kb mBAFF promoter exhibited higher activity than shorter constructs, correlating with NF-kappaB binding sites.
- LPS stimulation, serum deprivation, and H2O2 treatment increased mBAFF promoter activity in a time-dependent manner.
- ROS production was linked to mBAFF promoter activity, as evidenced by NAC's inhibitory effect.
- LPS and serum starvation enhanced NF-kappaB activation, correlating with increased mBAFF promoter activity.
- Co-expression of p65 and p300 augmented mBAFF promoter activity, while dominant-negative p300 inhibited it.
- ChIP assays confirmed p300 binding to the BAFF promoter.
Conclusions:
- mBAFF expression is regulated by promoter activation involving NF-kappaB.
- The co-activator p300 plays a critical role in this process, cooperating with NF-kappaB.
- ROS signaling pathways are involved in the regulation of mBAFF promoter activity.
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