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Published on: July 22, 2012
G and P rotavirus genotypes in stool samples from children in Teresina, State of Piauí
Carla Isabel Macedo1, Alice Christofoletti, Veridiana Munford
1Institute Pasteur São Paulo, SP Brasil. cimacedo@usp.br
Insights
Rotavirus strains in young children with diarrhea in Brazil showed unusual G and P genotype combinations. High percentages of mixed genotypes suggest potential gene reassortment and animal-to-human rotavirus transmission.
Area of Science:
- Virology
- Molecular Biology
- Public Health
Background:
- Rotavirus is a leading cause of severe diarrheal disease in infants and young children globally.
- Understanding rotavirus genotype diversity is crucial for vaccine development and epidemiological surveillance.
Purpose of the Study:
- To molecularly characterize G and P rotavirus genotypes in stool specimens from young children with diarrhea in Teresina, Piauí.
- To investigate the prevalence of common and unusual rotavirus genotype combinations.
Main Methods:
- Reverse transcriptase polymerase chain reaction (RT-PCR) was used for molecular characterization.
- 123 stool specimens from children aged 0-2 years were analyzed.
Main Results:
- The most common P genotypes were P[8] (17.1%) and P[1] (4.9%), with a high prevalence of mixtures (27.6%).
- The most common G genotypes were G1 (25.2%) and G5 (13.8%), with mixtures found in 41.5% of samples.
- Unusual combinations like P[1]G5 and P[1]+P[8]G5 were observed, along with frequent mixtures of human and animal rotavirus genotypes.
Conclusions:
- The study identified a significant diversity of rotavirus G and P genotypes in the studied population.
- The high frequency of mixed genotypes and unusual combinations suggests potential gene reassortment and interspecies transmission events.
Abstract:
A total of 123 stool specimens collected in Teresina, Piauí between 1994 and 1996, from 0 to 2-year-old children with diarrhea, were used for this study. Molecular characterization of the G and P rotavirus genotypes was performed using the reverse transcriptase polymerase chain reaction. The following results were obtained for the P genotypes: P[8] (17. 1%), P[1] (4. 9%), P[4] (3. 3%), P[6, M37] (2. 4%) and mixtures (27. 6%). The P[1]+P[8] mixture was found in 19. 5% of the samples. For the G genotypes, the results were: G1 (25. 2%), G5 (13. 8%), G2 (2. 5%), G4 (2. 5%), G9 (0. 8%) and mixtures (41. 5%). G1+G5 was the mixture most frequently found (12. 1%). Our results showed unusual combinations such as P[1]G5 and P[1]+P[8]G5. The high percentage of mixtures and unusual combinations containing mixtures of human and animal rotavirus genotypes strongly suggests the possibility of gene reassortment and interspecies transmission.
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