Related Experiment Video
Updated: Jul 11, 2026

Detection of Bacteria Using Fluorogenic DNAzymes
Published on: May 28, 2012
Fluorescence sensing and selective binding of L- and D-tryptophan-modified permethylated beta-cyclodextrins for
1Department of Chemistry, State Key Laboratory of Elemento-Organic Chemistry, Nankai University, Tianjin 300071, PR China. yuliu@nankai.edu.cn
Abstract:
Two tryptophan-modified permethylated beta-cyclodextrins, 6I-L-Trp-6I-deoxy-2I,3I-di-O-methyl-hexakis(2II-VII,3II-VII,6II-VII-tri-O-methyl-beta-cyclodextrin (3) and 6I-D-Trp- 6I-deoxy-2I,3I-di-O-methyl-hexakis(2II-VII,3II-VII,6II-VII-tri-O-methyl)-beta-cyclodextrin (4), were synthesized, and their binding behaviors were investigated with the aliphatic oligopeptides, Leu-Gly, Gly-Leu, Gly-Pro, Glu-Glu, and Gly-Gly. Fluorescence spectrophotometric studies indicated that 3 and 4 can act as efficient fluorescence sensors for aliphatic oligopeptides. Due to their intermolecular co-inclusion binding mode with substrates, 3 and 4 not only afforded high binding constants of up to 10(3)-10(4) M(-1) for guest oligopeptides but also good molecular selectivities of up to ca. 7 for Gly-Gly/Leu-Gly and Glu-Glu/Gly-Gly pairs.
Related Concept Videos
Protein Dynamics in Living Cells
Fluorescent recovery after photobleaching (FRAP) is a fluorescent-protein-based detection technique used to quantify protein movement rates within the cell. This method exposes a small portion of the cell to an intense laser beam. The laser beam causes permanent photobleaching of the fluorophore-tagged proteins in the exposed region. As the bleached...
Labeling DNA Probes
Radioisotopes, fluorophores, or small molecule binding partners like biotin or digoxigenin, are the most widely used reporter tags for labeling DNA probes. These labels can be attached to the probe DNA molecule via...

