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Updated: Jul 16, 2026

Quantitative Magnetic Resonance Imaging of Skeletal Muscle Disease
Published on: December 18, 2016
Impact of incidental magnetization transfer effects on inversion-recovery sequences that use a fast spin-echo readout
Simon J P Meara1, Gareth J Barker
1Imaging Science and Biomedical Engineering Research Group, University of Manchester, Manchester, United Kingdom. simon.meara@manchester.ac.uk
Abstract:
Multislice MR images obtained using a fast spin-echo (FSE) readout are strongly affected by magnetization transfer (MT) effects, which will cause a decrease in the observed longitudinal relaxation times for tissues with a large bound water component. This is pertinent for FSE-based inversion-recovery (IR) sequences, as it would be expected to cause a change in the required inversion times. Furthermore, the effect will be greater as the number of slices that are acquired within the repetition time (TR) is increased. A pseudo-3D IR-FSE sequence was used to obtain images of a phantom consisting of thermally crosslinked bovine serum albumin. It was found that increasing the number of slabs acquired per TR period led to a decrease in the inversion time that maximally suppressed the signal from the MT phantom; this was not the case for water. This has important consequences for any IR imaging sequence that uses an FSE readout.
Insights
Magnetization transfer (MT) effects in multislice fast spin-echo (FSE) MRI alter inversion times. Increasing slices per TR decreased optimal inversion time for MT phantoms, impacting FSE-based inversion-recovery (IR) imaging.
Area of Science:
- Magnetic Resonance Imaging (MRI)
- Biophysical Characterization
- Medical Physics
Background:
- Multislice fast spin-echo (FSE) magnetic resonance (MR) imaging is susceptible to magnetization transfer (MT) effects.
- MT effects reduce observed longitudinal relaxation times in tissues with significant bound water.
- This phenomenon is particularly relevant for FSE-based inversion-recovery (IR) sequences, potentially altering required inversion times.
Purpose of the Study:
- To investigate the impact of increasing slice acquisition within the repetition time (TR) on MT effects in FSE-IR sequences.
- To determine how these effects influence the inversion time required for maximal signal suppression in specific phantoms.
Main Methods:
- A pseudo-3D inversion-recovery fast spin-echo (IR-FSE) sequence was employed.
- Images were acquired using a phantom composed of thermally crosslinked bovine serum albumin.
- The number of slices acquired per TR period was systematically varied.
Main Results:
- Increasing the number of acquired slabs per TR period resulted in a decreased inversion time for maximal signal suppression in the MT phantom.
- This effect was not observed in a pure water phantom, highlighting the specificity to MT-susceptible tissues.
- The findings demonstrate a clear dependence of optimal inversion time on the number of slices acquired within the TR.
Conclusions:
- Magnetization transfer effects significantly influence FSE-based IR imaging, particularly with increased slice acceleration.
- The optimal inversion time for MT-sensitive tissues changes with the number of slices acquired per TR.
- These findings have critical implications for the accurate implementation and interpretation of FSE-IR sequences in clinical and research settings.
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