Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Lytic Cycle of Bacteriophages01:30

Lytic Cycle of Bacteriophages

Bacteriophages, also known as phages, are specialized viruses that infect bacteria. A key characteristic of phages is their distinctive “head-tail” morphology. A phage begins the infection process (i.e., lytic cycle) by attaching to the outside of a bacterial cell. Attachment is accomplished via proteins in the phage tail that bind to specific receptor proteins on the outer surface of the bacterium. The tail injects the phage’s DNA genome into the bacterial cytoplasm. In the lytic replication...
DNA Bacteriophages01:26

DNA Bacteriophages

Bacteriophages, or phages, are viruses that specifically infect bacteria, utilizing their genetic material to hijack host cellular machinery for replication. DNA bacteriophages employ single-stranded DNA (ssDNA) or double-stranded DNA (dsDNA) genomes. These phages exhibit diverse replication strategies and host interactions, influencing their ecological roles and applications in biotechnology and medicine.ssDNA BacteriophagesssDNA phages, with their small genomes, utilize unique strategies to...
Bacteriophages of the Human Virome01:23

Bacteriophages of the Human Virome

Bacteriophages are found throughout the human body. They may even outnumber eukaryotic viruses, forming an important and dynamic component of the human virome. Indeed, phages represent the most abundant viral entities, with densities in the gut reaching up to 10⁹ particles per gram of fecal matter, and many belonging to orders such as Caudovirales and Microviridae, while a substantial proportion remains unclassified as viral “dark matter.”Lysogeny and Genetic ExchangeIn the gut, bacteriophages...
Mutations in Microorganisms01:18

Mutations in Microorganisms

Mutations are heritable changes in an organism’s genome involving alterations in the base sequence of DNA or RNA. These changes can influence cellular processes and phenotypic traits, potentially transforming the unaltered wild type into a mutant form. Such changes, termed forward mutations, are pivotal in shaping the genetic diversity of organisms.RNA viruses exhibit the highest mutation rates due to the absence of robust proofreading mechanisms during genome replication. In contrast,...
Viral Replication: Lysogenic Cycle01:16

Viral Replication: Lysogenic Cycle

The lysogenic cycle is a crucial viral replication strategy that allows bacteriophages to persist within host cells without immediately destroying them. This process is primarily observed in temperate phages, such as bacteriophage lambda (λ), which infects Escherichia coli. The cycle allows the viral genome to persist across bacterial generations while keeping host cells viable.Integration of the Viral GenomeUpon infection, bacteriophage lambda attaches to the bacterial surface and injects its...
Lysogenic Cycle of Bacteriophages00:43

Lysogenic Cycle of Bacteriophages

In contrast to the lytic cycle, phages infecting bacteria via the lysogenic cycle do not immediately kill their host cell. Instead, they combine their genome with the host genome, allowing the bacteria to replicate the phage DNA along with the bacterial genome. The incorporated copy of the phage genome is called the prophage. Some prophages can re-activate and enter the lytic cycle. This often occurs in response to a perturbation, such as DNA damage, but can also transpire in the absence of...

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

The Origin of Life in the Light of Evolution.

ArXiv·2026
Same author

Divergent evolutionary trajectories and mechanistic insights into arsenite and antimonite adaptation in the bacterium Achromobacter sp. As-55.

Ecotoxicology and environmental safety·2026
Same author

Cross-immunity to therapeutic Kayvirus staphylophages reveals conserved immunogenic epitopes in patients.

Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases·2026
Same author

Rage against the mean: a perspective on measuring fitness of individual phage particles.

Npj viruses·2026
Same author

Phage Therapy and Global Health Equity: Opportunities in the Era of Antibiotic Resistance.

Annual review of virology·2026
Same author

Bacterial Receptors but Not Anti-Phage Defense Mechanisms Determine Host Range for a Pair of <i>Pseudomonas aeruginosa</i> Lytic Phages.

bioRxiv : the preprint server for biology·2026

Related Experiment Video

Updated: Jul 11, 2026

Precise Phage Mutagenesis with NgTET-Assisted CRISPR-Cas Systems
10:52

Precise Phage Mutagenesis with NgTET-Assisted CRISPR-Cas Systems

Published on: October 14, 2025

Optimal bacteriophage mutation rates for phage therapy.

David T Kysela1, Paul E Turner

  • 1Department of Ecology and Evolutionary Biology, Yale University, P.O. Box 208106, New Haven, CT 06520-8106, USA. david.kysela@yale.edu

Journal of Theoretical Biology
|October 2, 2007
PubMed
Summary

Phage mutation rates impact bacterial infection treatment. An optimal rate balances beneficial and harmful mutations, enhancing phage therapy efficacy against resistant bacteria.

More Related Videos

Understanding the Impact of Temperate Bacteriophages on Their Lysogens Through Transcriptomics
09:23

Understanding the Impact of Temperate Bacteriophages on Their Lysogens Through Transcriptomics

Published on: January 5, 2024

Bacteriophage Effectiveness for Biocontrol of Foodborne Pathogens Evaluated via High-Throughput Settings
07:22

Bacteriophage Effectiveness for Biocontrol of Foodborne Pathogens Evaluated via High-Throughput Settings

Published on: August 19, 2021

Related Experiment Videos

Last Updated: Jul 11, 2026

Precise Phage Mutagenesis with NgTET-Assisted CRISPR-Cas Systems
10:52

Precise Phage Mutagenesis with NgTET-Assisted CRISPR-Cas Systems

Published on: October 14, 2025

Understanding the Impact of Temperate Bacteriophages on Their Lysogens Through Transcriptomics
09:23

Understanding the Impact of Temperate Bacteriophages on Their Lysogens Through Transcriptomics

Published on: January 5, 2024

Bacteriophage Effectiveness for Biocontrol of Foodborne Pathogens Evaluated via High-Throughput Settings
07:22

Bacteriophage Effectiveness for Biocontrol of Foodborne Pathogens Evaluated via High-Throughput Settings

Published on: August 19, 2021

Area of Science:

  • Microbiology
  • Genetics
  • Evolutionary Biology

Background:

  • Bacteriophages (phages) are viruses that infect bacteria and are explored for antimicrobial therapy.
  • Phage mutation can generate variants that overcome bacterial resistance, but also accumulate deleterious mutations.
  • Understanding the role of mutation rate is crucial for optimizing phage therapy effectiveness.

Purpose of the Study:

  • To model the impact of varying bacteriophage mutation rates on the efficacy of phage therapy.
  • To identify an optimal mutation rate that balances beneficial and deleterious mutations.
  • To assess the influence of inoculum density and mutation-selection balance on phage therapy outcomes.

Main Methods:

  • Mathematical modeling was used to simulate phage-bacterial interactions under different mutation rates.
  • The study analyzed the trade-offs between beneficial mutations (overcoming resistance) and deleterious mutations (genetic load).
  • Parameters such as mutation rate, inoculum density, and selective coefficients were varied in the model.

Main Results:

  • An approximate mutation rate of 0.1 deleterious mutations per genome per generation represents a balance between beneficial diversity and genetic load.
  • Increased phage inoculum density can unexpectedly elevate resistant bacterial populations by limiting in situ mutant phage production.
  • Engineering higher mutation rates beyond the optimum is beneficial only with very weak selection against deleterious mutations ( < 0.01).

Conclusions:

  • The optimal bacteriophage mutation rate is critical for effective phage therapy, balancing adaptation and genetic load.
  • Phage therapy strategies should consider inoculum density to avoid unintended increases in bacterial resistance.
  • Modifying mutation rates requires careful consideration of selection pressures to avoid negative impacts on therapeutic efficacy.