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Updated: Jul 11, 2026

Identification of Cyclin-dependent Kinase 1 Specific Phosphorylation Sites by an In Vitro Kinase Assay
Published on: May 3, 2018
Differential modification of p27Kip1 controls its cyclin D-cdk4 inhibitory activity
Melissa K James1, Arpita Ray, Dina Leznova
1Department of Pediatrics, SUNY Downstate Medical Center, 450 Clarkson Ave., Box 49, Brooklyn, NY 11203, USA. stacy.blain@downstate.edu
Abstract:
Whether p27 is a cyclin D-cdk4/6 inhibitor or not is controversial, and how it might switch between these two modes is unknown. Arguing for a two-state mechanism, we show that p27 bound to cyclin D-cdk4 can be both inhibitory and noninhibitory, due to its differential-growth-state-dependent tyrosine phosphorylation. We found that p27 from proliferating cells was noninhibitory but that p27 from arrested cells was inhibitory, and the transition from a bound noninhibitor to a bound inhibitor was not due to an increase in p27 concentration. Rather, two tyrosine residues (Y88 and Y89) in p27's cdk interaction domain were phosphorylated preferentially in proliferating cells, which converted p27 to a noninhibitor. Concordantly, mutation of these sites rendered p27 resistant to phosphorylation and locked it into the bound-inhibitor mode in vivo and in vitro. Y88 was directly phosphorylated in vitro by the tyrosine kinase Abl, which converted p27 to a cdk4-bound noninhibitor. These data show that the growth-state-dependent tyrosine phosphorylation of p27 modulates its inhibitory activity in vivo.
Insights
The cell cycle regulator p27 can switch between inhibiting and not inhibiting cyclin D-cdk4/6. Growth-state-dependent tyrosine phosphorylation of p27 controls its inhibitory activity.
Area of Science:
- Cell Biology
- Molecular Biology
- Biochemistry
Background:
- The role of p27 as a cyclin-dependent kinase (CDK) inhibitor is debated.
- The mechanisms governing p27's switch between inhibitory and non-inhibitory states are unclear.
Purpose of the Study:
- To investigate the two-state mechanism of p27's inhibition of cyclin D-CDK4/6.
- To elucidate how p27's inhibitory activity is modulated by growth state.
Main Methods:
- Analysis of p27 from proliferating and arrested cells.
- Site-directed mutagenesis of tyrosine residues Y88 and Y89 in p27.
- In vitro phosphorylation assays using tyrosine kinase Abl.
Main Results:
- p27 bound to cyclin D-CDK4 exhibits both inhibitory and non-inhibitory functions.
- Tyrosine phosphorylation of p27 at Y88 and Y89, preferentially in proliferating cells, renders it non-inhibitory.
- Mutating Y88 and Y89 locks p27 in an inhibitory state.
- Abl tyrosine kinase directly phosphorylates Y88, converting p27 to a non-inhibitor.
Conclusions:
- p27's inhibitory activity is dynamically regulated by growth-state-dependent tyrosine phosphorylation.
- Phosphorylation at Y88 and Y89 is a key mechanism controlling p27's function as a cyclin D-CDK4/6 inhibitor.
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M-Cdk Drives Transition Into Mitosis
Cyclin-dependent kinases, or Cdks, work in concert with cyclins to control cell cycle transitions. M-Cdk, a complex of Cdk1 bound to M cyclin, is a well-known example of this coordinated control that drives the transition from the G2 to the M phase.
M cyclin...

